Edited Conference Proceedings
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Milan Sonka and J. M. Fitzpatrick, ed., Medical Imaging 2002: Image Processing, vol. 4684 Proc. SPIE, SPIE Press (May 2002).
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Milan Sonka and J. M. Fitzpatrick, ed., Medical Imaging 2003: Image Processing, vol. 5032 Proc. SPIE, SPIE Press (May 2003).
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J. M. Fitzpatrick and Milan Sonka, ed., Medical Imaging 2004: Image Processing, vol. 5370 Proc. SPIE, SPIE Press (May 2004).
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J. M. Fitzpatrick and J. M. Reinhardt, ed., Medical Imaging 2005: Image Processing, vol. 5747 Proc. SPIE, SPIE Press (April 2005).
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B. M. Dawant, G. E. Christensen, J. M. Fitzpatrick, and D. Rueckert, Biomedical Image Registration 5th Intnl. Workshop, WBIR 2012, Lecture Notes in Computer Science, vol. 7359 (July 2012). DOI: 10.1007/978-3-642-31340-0
Archival Journal Articles
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J. M. Fitzpatrick and E. A. Desloge, “Nonequilibrium gas reaction kinetics: the nonvanishing effect of vanishing products,” J. Chem. Physics 59, 5526–5528 (Nov 1973).
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B. Shizgal and J. M. Fitzpatrick, “Matrix elements of the linear Boltzmann collision operator for systems of two components at different temperatures,” Chem. Physics 6, 54–65 (Oct 1974).
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B. Shizgal and J. M. Fitzpatrick, “Temperature relaxation in a binary gas I: steady state solution,” J. Chem. Physics 63, 131–137 (Jul 1975).
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B. Shizgal and J. M. Fitzpatrick, “Temperature relaxation in a binary gas II: time dependent solution,” J. Chem. Physics 63, 138–142 (Jul 1975).
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B. Shizgal and J. M. Fitzpatrick, “The possible failure of relaxation time comparisons in the justification of local thermodynamic equilibrium,” Physical Rev. 18, 267–276 (Jul 1978).
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J. M. Fitzpatrick and B. Shizgal, “Explicit demonstration of epochal relaxation in a binary gas mixture,” Physics of Fluids 22, 436–438 (Mar 1979).
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B. Shizgal and J. M. Fitzpatrick, “On the statistical mechanical interpretation of the translational energy dependence of rate processes,” Canadian J. Physics 57, 486–489 (Mar 1979).
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B. Shizgal and J. M. Fitzpatrick, “Nonequilibrium time dependent theory of hot atom reactions I: Model calculations,” J. Chem. Physics 72, 3143–3155 (Mar 1980).
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J. M. Fitzpatrick and Michael R. Leuze, “A class of one-to-one two dimensional transformations”, Computer Vision, Graphics, and Image Processing 39, 369–382 (Sep 1987).
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J. M. Fitzpatrick, D. R. Pickens, J. J. Grefenstette, R. R. Price, A. E. James, “Techniques for automatic motion correction in digital subtraction angiography”, Optical Eng. 26, 1085–1093 (Nov 1987).
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J. M. Fitzpatrick and J. J. Grefenstette, “Genetic algorithms in noisy environments”, Machine Learning 3, 101–120 (Oct 1988).
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J. M. Fitzpatrick, “The existence of geometrical density-image transformations corresponding to object motion”, Computer Vision, Graphics, and Image Processing 44, 155–174 (Nov 1988).
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G. R. McNeal*, W. H. Maynard, R. A. Branch, T. A. Powers, P. A. Arns, K. Gunter, J. M. Fitzpatrick, and C. L. Partain, “Liver volume measurements and three dimensional display from MR images”, Radiology 169, 851–854 (Dec 1988).
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V. R. Mandava*, J. M. Fitzpatrick, and D. R. Pickens, “Adaptive search space scaling in digital image registration”, IEEE Transactions on Medical Imaging 8, 251–262 (Sep 1989).
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V. R. Mandava*, R. J. Maciunas, and J. M. Fitzpatrick, “Tapetool: a software tool for importing image data from image acquisition computers to image processing computers”, Computer Methods and Programs in Biomedicine 213–219 (Dec 1990).
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H. Chang* and J. M. Fitzpatrick, “A technique for accurate magnetic resonance imaging in the presence of field inhomogeneities”, IEEE Transactions on Medical Imaging 11, 319–329 (Sep 1992). PMID: 18222873
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R. J. Maciunas, R. L. Galloway, J. M. Fitzpatrick, V. R. Mandava*, C. E. Edwards*, and G. S. Allen, “A universal system for interactive image-directed neurosurgery”, Stereotactic Functional Neurosurgery 58, 108–113 (1992).
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J. M. Fitzpatrick and L. L. Schumaker, “On one-to-one bivariate transformations”, J. Approximation Theory 72, 40–53 (Jan 1993).
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Y. Ge* and J. M. Fitzpatrick, “A set of one-to-one two-dimensional biquadratic transformations”, Computers & Mathematics with Applications 27, 13–25 (Jul 1994).
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Y. Ge*, J. M. Fitzpatrick, J. R. Votaw, S. Gadamsetty*, R. J. Maciunas, R. M. Kessler, and R. A. Margolin, “Retrospective registration of PET and MR brain images: an algorithm and its stereotactic validation”, Journal of Computer Assisted Tomography 18, 800–810 (Sep-Oct 1994).
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M. Y. Wang*, C. R. Maurer*, Jr., J. M. Fitzpatrick, and R. J. Maciunas, “An automatic technique for finding and localizing externally attached markers in CT and MR volume images of the head”, IEEE Transactions on Biomedical Engineering 43, 627–637 (Jun 1996). PMID: 8987267
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C. Maurer*, Jr., G. B. Aboutanos*, B. M. Dawant, S. Gadamsetty*, R. A. Margolin, R. J. Maciunas, and J. M. Fitzpatrick, “Effect of geometrical distortion correction in MR on image registration accuracy”, Journal of Computer Assisted Tomography 20, 666–679 (Jul-Aug 1996). [This article is substantially identical to Conference Proceedings article 117.]
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Y. Ge*, J. M. Fitzpatrick, B. M. Dawant, J. Bao*, R. M. Kessler, and R. A. Margolin, “Accurate localization of cortical convolutions in MR brain images”, IEEE Transactions on Medical Imaging 15, 418–428 (Aug 1996).
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Y. Ge* and J. M. Fitzpatrick, “On the generation of skeletons from discrete Euclidean distance maps”, IEEE Transactions on Pattern Analysis and Machine Intelligence 18, 1055-1066 (Nov 1996).
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C. R. Maurer*, Jr., G. B. Aboutanos*, B. M. Dawant, and J. M. Fitzpatrick, “Registration of 3-D images using weighted geometrical features”, IEEE Transactions on Medical Imaging 15, 836–849 (Dec 1996).
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R. J. Maciunas, J. M. Fitzpatrick, S. Gadamsetty*, C. R. Maurer*, Jr., “A universal method for geometric correction of magnetic resonance images for stereotactic neurosurgery”, Stereotactic Functional Neurosurgery 66, 137–140 (1996). [Note: This article is identical to Conference Proceedings article .]
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J. West*, J. M. Fitzpatrick, M. Y. Wang*, B. M. Dawant, C. R. Maurer*, Jr., R. M. Kessler, R. J. Maciunas, et al., “Comparison and evaluation of retrospective intermodality image registration techniques”, Journal of Computer Assisted Tomography 21, 554–566 (Jul-Aug 1997). PMID: 9216759
[This paper was one of ten winners of the Inaugural Giovanni Di Chiro Award for Outstanding Scientific Research, presented by the Journal of Computer Assisted Tomography.]
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C. R. Maurer*, Jr., J. M. Fitzpatrick, M. Y. Wang*, R. L. Galloway, Jr., R. J. Maciunas, G. S. Allen, “Registration of head volume images using implantable fiducial markers”, IEEE Transactions on Medical Imaging 16, 447–462 (Aug 1997). PMID: 9263002
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B. B. Burkey, M. T. Speyer, R. J. Maciunas, J. M. Fitzpatrick, R. L. Galloway, G. S. Allen, “Sublabial, transseptal, transsphenoidal approach to the pituitary region guided by the ACUSTAR system”, Otolaryngology—Head and Neck Surgery 118, 191–194 (Feb 1998).
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D. L. G. Hill, C. R. Maurer*, Jr., C. Studholme, J. M. Fitzpatrick, D. J. Hawkes, “Correcting scaling errors in tomographic images using a nine degree of freedom registration algorithm”, Journal of Computer Assisted Tomography 22, 317–323 (Mar-Apr 1998).
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J. M. Fitzpatrick, D. L. G. Hill, Y. Shyr, J. B. West*, C. Studholme, C. R. Maurer*, Jr. “Visual assessment of the accuracy of retrospective registration of MR and CT images of the brain”, IEEE Transactions on Medical Imaging 17, 571–585 (Aug 1998).
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D. L. G. Hill, C. R. Maurer*, Jr., R. J. Maciunas, J. A. Barwise, J. M. Fitzpatrick, and M. Y. Wang*, “Measurement of intraoperative brain surface deformation under a craniotomy”, Neurosurgery 43, 514–526 (Sep 1998).
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J. M. Fitzpatrick, J. B. West*, C. R. Maurer*, Jr., “Predicting error in rigid-body, point-based image registration”, IEEE Transactions on Medical Imaging 17, 694–702 (Oct 1998). PMID: 9874293
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J. L. Herring*, B. M. Dawant, C. R. Maurer*, Jr., D. Muratore*, R. L. Galloway, J. M. Fitzpatrick, “Surface-based registration of CT images to physical space for image-guided surgery of the spine: a sensitivity study”, IEEE Transactions on Medical Imaging 17, 743–752 (Oct 1998).
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C. R. Maurer*, Jr., R. J. Maciunas, J. M. Fitzpatrick, “Registration of head CT images to physical space using a weighted combination of points and surfaces”, IEEE Transactions on Medical Imaging 17, 753–761 (Oct 1998).
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J. B. West*, J. M. Fitzpatrick, M. Y. Wang*, B. M. Dawant, C. R. Maurer*, Jr., R. M. Kessler, and R. J. Maciunas, “Retrospective intermodality registration techniques: surface-based versus volume-based”, IEEE Transactions on Medical Imaging 18, 144–150 (Feb 1999).
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F. Shtern, M. W. Vannier, D. Winfield, K. Doi, J. S. Duncan, J. M. Fitzpatrick, R. Kikinis, C. A. Pelizzari, S. M. Pizer, R. A. Robb, C. J. Vyborny, “Report of the working group on digital mammography: Computer-aided diagnosis and 3D image analysis and display”, 48th Ann. Meeting Assn. Univ. Radiologists, Orlando, FL, April 5–9, 2000, Academic Radiology, 6, Supplement 5, S224–S256 (June 1999).
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J.D. Stefansic, A.J. Herline, Y. Shyr, W.C. Chapman, J.M. Fitzpatrick, and R.L. Galloway, “Registration of physical space to laparoscopic image space for use in minimally invasive hepatic surgery”, IEEE Transactions on Medical Imaging 19, 1012–1023 (Oct 2000).
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J. B. West*, J. M. Fitzpatrick, S. Toms, C. R. Maurer, Jr.*, R. J. Maciunas, “Fiducial point placement and the accuracy of point-based, rigid-body registration”, Neurosurgery 48, 810–817 (April 2001). PMID: 11322441
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J. M. Fitzpatrick and R. L Galloway, “The use of fiducials in the registration of 3D images”, Automedica: Special Issue: Engineering Approaches to Neurological Surgery 20 (Jun 2001).
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J. M. Fitzpatrick and J. B. West*, “The distribution of target error in rigid-body, point-based registration”, IEEE Transactions on Medical Imaging 20, 917–927 (Sep 2001). PMID: 11585208
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P. Jannin, J. M. Fitzpatrick, D. J. Hawkes, X. Pennec, R. Shahidi, M. W. Vannier, “Validation of medical image processing in image-guided therapy”, IEEE Transactions on Medical Imaging 21(12), 1445–1448 (Dec 2002).
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D. A. Yoder*, Y. Zhao, C. B. Paschal, J. M. Fitzpatrick, “MRI simulator with object-specific field map calculations”, Magnetic Resonance Imaging, 22, 315–328 (Apr 2004).
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W.C. Lavely, C. Scarfone, H. Cevikalp, R. Li, D. W. Byrne, A. J. Cmelak, B. M. Dawant, R. R. Price, D. E. Hallahan, J. M. Fitzpatrick, “Phantom validation of coregistration of PET and CT for image-guided radiotherapy”, Medical Physics, 31, 1084–1092 (May 2004).
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W. R. Riddle, R. Li, J. M. Fitzpatrick, S. C. DonLevy, B. M. Dawant, R. R. Price, “Characterizing Changes In MR images with color-coded Jacobians”, Magnetic Resonance Imaging 22, 769–777 (Jul 2004).
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Z. Cao, S. Pan, R. Li, R. Balachandran*, J. M. Fitzpatrick, W. C. Chapman., B. M. Dawant, “Registration of Medical Images Using an Interpolated Closest Point Transform: Method and Validation”, Medical Image Analysis, 8, 421–427 (Dec 2004).
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R. F. Labadie, R. J. Shah*, S. S. Harris, E. Cetinkaya*, D. S. Haynes, M. Fenlon, S. Juscyzk, R. L. Galloway, J. M. Fitzpatrick, “Submillimetric Target-Registration Error using a Novel, Non-Invasive Fiducial System for Image Guided Otologic-Surgery”, J. Computer-Aided Surgery, 9(4), 145-153 (December 2004).
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J. M. Fitzpatrick, P. E. Konrad, C. Nickele*, E. Cetinkaya*, C. Kao, “Accuracy of customized miniature stereotactic platforms”, Stereotactic and Functional Neurosurgery, 83, 25-31 (April 2005). PMID: 11585208
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R. F. Labadie, R. J. Shah*, S. S. Harris, E. Cetinkaya*, D. S. Haynes, M. Fenlon, S. Juscyzk S, R. L. Galloway, J. M. Fitzpatrick, “In vitro assessment of image-guided otologic surgery: submillimeter accuracy within the temporal bone”. Otolaryngol. Head Neck Surg., 132;435-42 (March 2005). PMID: 15746858
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R. F. Labadie, P. Choudhury*, E. Cetinkaya*, R. Balachandran*, D. S. Haynes, M. Fenlon, S. Juscyzk, J. M. Fitzpatrick, “Minimally-invasive, image-guided, facial-recess approach to the middle ear: demonstration of the concept of percutaneous cochlear access in vitro”, Otology and Neurotology, 26, 557-562 (July 2005).
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R. F. Labadie, B. M. Davis, J. M. Fitzpatrick, “Image Guided Surgery–What is the Accuracy?”, Current Opinion in Otolaryngology and Head and Neck Surg., 13, 27-31 (2005).
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F. M. Warren, R. Balachandran*, J. M. Fitzpatrick, R. F. Labadie, “Percutaneous cochlear access using bone-mounted, customized drill guides: demonstration of concept in vitro”, Otology and Neurotology, 28(3), 325-329 (Apr 2007).
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N. Xu*, J. M. Fitzpatrick, B. M. Dawant, D. R. Pickens, V. L. Morgan, “Computer-generated fMRI phantoms with motion-distortion interaction“, Magnetic Resonance Imaging, 25(10), 1376-1384 (2007).
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R. F. Labadie, O. Majdani, J. M. Fitzpatrick, “Image-guided technique in neurotology”, Otolaryngology Clinics of N. Amer., 40(3), 611-24 (Jun 2007).
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Y. Li*, N. Xu*, J. M. Fitzpatrick, V. L. Morgan, D. R. Pickens, B. M. Dawant, “Accounting for signal loss due to dephasing in the correction of distortions in gradient-echo EPI via nonrigid registration”, IEEE Transactions on Medical Imaging, 26(12), 1698-1707 (Dec 2007).
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D. Skerl, B. Likar, J. M. Fitzpatrick, F. Pernus, “Comparative evaluation of similarity measures for rigid registration of multi-modal head images”, Physics in Medicine and Biology, 52(18), 5587-5601 (2007).
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R. F. Labadie, J. H. Noble*, B. M. Dawant, Ramya Balachandran, Omid Majdani, J. M. Fitzpatrick, “Clinical Validation of percutaneous cochlear implant surgery: Initial report”, The Laryngoscope, 118(6), 1031-1039 (June 2008). PMID: 18401279
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Y. Li*, N. Xu*, J. M. Fitzpatrick, V. L. Morgan, D. R. Pickens, B. M. Dawant, “Geometric distortion correction for echo planar images using nonrigid registration with spatially varying scale”, Magnetic Resonance Imaging, 26 (10), 1388-1397 (December 2008).
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R. Balachandran, J. M. Fitzpatrick, R. F. Labadie. Accuracy of Image-guided Surgical Systems at the Lateral Skull Base as Clinically Assessed Using Bone-Anchored Hearing Aid Posts as Surgical Targets, Otology and Neurotology, 29(8), 1050-5, (December 2008). PMID: 18836389
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R. Balachandran*, J. Mitchell, B. M. Dawant, J. M. Fitzpatrick, “Accuracy evaluation of MicroTargeting™ platforms for deep-brain stimulation using virtual targets”, Transactions on Biomedical Engineering, 56(1), 37-44, (January 2009). PMID: 19224717
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R. F. Labadie, J. Mitchell, R. Balachandran, and J. M. Fitzpatrick, “Customized, rapid-production microstereotactic table for surgical targeting: description of concept and in vitro validation”, Int. J. Comput. Assist. Radiol. Surg., 4(3), 273-280 (May 2009). PMID: 20033593
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R. F. Labadie, R Balachandran, J Mitchell, J. H. Noble, O Majdani, B. M. Dawant, M Bennett, D. S. Haynes, J. M. Fitzpatrick, “Clinical validation study of percutaneous cochlear access using patient customized micro-stereotactic frames,” Otology and Neurotology , 31(1), 94-99 (January 2010). PMID: 20019561
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J. M. Fitzpatrick, “The role of registration in accurate surgical guidance”, Journal of Engineering in Medicine, 224(5), 607-622 (May 2010).
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J. H. Noble, O. Majdani, R. F. Labadie, B. Dawant, J. M. Fitzpatrick, “Automatic determination of optimal linear drilling trajectories for cochlear access accounting for drill-positioning error,” J. Medical Robotics and Comp. Asst. Surg. 6(3): 281-290 (May 2010). 20812268
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P. D’Haese, S. Pallavaram, P. E. Konrad, J. Neimat, J. M. Fitzpatrick, B. M. Dawant, “Clinical accuracy of a customized stereotactic platform for deep-brain stimulation after accounting for brain shift”, Stereotactic and Functional Neurosurgery 88(2), 81-87 (January 2010). PMID: 20068383
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R. Balachandran, E. B. Welch, Benoit M. Dawant, J. M. Fitzpatrick, “Effect of MR Distortion on Targeting for Deep-Brain Stimulation”, IEEE Trans. Biomed. Eng., 57(7), 1729-1735 (July 2010). PMID: 20388592
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R. Balachandran, J. E. Mitchell, G. Blachon, J. H. Noble, B. M. Dawant, J. M. Fitzpatrick, R. F. Labadie, “Percutaneous cochlear implant drilling via customized frames: An in vitro study”, Otolaryngology—Head and Neck Surgery 142(3), 421-426 (March 2010). PMID: 20172392
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J. Mitchell, R. F. Labadie, J. M. Fitzpatrick, “Design of a novel device to provide assured seating of bone implanted fiducial markers”, Journal of Medical Devices 4(2), 025002:1-4 (June 2010).
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Danilchenko*, R. Balachandran, J. L. Toennies, S. Baron, B. Munske, J. M. Fitzpatrick, T. J. Withrow, R. J. Webster III, R. F. Labadie, “Robotic Mastoidectomy”, Otology and Neurotology 32(1), 11-16 (January 2011). PMID: 21042227
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Danilchenko* and J.M. Fitzpatrick, “General approach to first-order error prediction in rigid point registration”, IEEE Transactions on Medical Imaging 30(3), 679-693 (March 2011). PMID: 21075718
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R. F. Labadie and J. M. Fitzpatrick, “Can otolaryngology compete with larger fields regarding impact factor? Is percentile-based impact factor a solution?”, Otolaryngology-Head and Neck Surgery, 145(1), 15-17 (Jul 2011).
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L. Maier-Hein, A. M. Franz, T. R. dos Santos, M. Schmidt, M. Fangerau, H.-P. Meinzer, and J. M. Fitzpatrick, “Convergent Iterative Closest-Point Algorithm to Accommodate Anisotropic and Inhomogeneous Localization Error”, IEEE Trans. Patt. Anal. Mach. Intell., 34(8), 1520-32 (Aug 2012). PMID: 22184256
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T. R. McRackan, R. Balachandran, G. S. Blachon, J. E. Mitchell, J. H. Noble, C. G. Wright, J. M. Fitzpatrick, B. M. Dawant, R. F. Labadie, “Validation of Minimally-Invasive, Image-guided Cochlear Implantation Using Advanced Bionics, Cochlear, and Medel Electrodes in a Cadaver Model”, Intnl. J. Comput. Assisted Radiol. and Surg. (April 2013). PMID: 23633113
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J. Burgner, A.L. Simpson, J.M. Fitzpatrick, R.A. Lathrop, S.D. Herrell, M.I. Miga, R.J. Webster III, “A study on the theoretical and practical accuracy of conoscopic holography-based surface measurements: toward image registration in minimally invasive surgery”, Intnl. J. Medical Robotics and Comput. Assisted Surg. 9:2, 190-203 (Jun 2013). PMID: 22761086
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R. Balachandran, M. A. Fritz, M. S. Dietrich, A. Danilchenko, J. E. Mitchell, V. L. Oldfield, W. W. Lipscomb, J. M. Fitzpatrick, J. S. Neimat, P. E. Konrad, R. F. Labadie, “Clinical testing of an alternate method of inserting bone-implanted fiducial markers”, Epub ahead of print (2014). PMID: 24493228
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R. Balachandran, F. A. Reda, J. H. Noble, G. S. Blachon, B. M. Dawant, J. M. Fitzpatrick, R. F. Labadie, “Minimally invasive image-guided cochlear implantation for pediatric patients: clinical feasibility study”, Otolaryngology—Head and Neck Surgery, 150: 631, online publication Jan 21, 2014, (April, 2014). DOI: 10.1177/0194599813519050
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R. F. Labadie, R. Balachandran, J. H. Noble, G. S. Blachon, J. E. Mitchell, F. A. Reda, B. M. Dawant, J. M. Fitzpatrick, “Minimally invasive cochlear implantation surgery: First report of clinical implementation”, Laryngoscope (August 2014).
Conference Proceedings
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J. M. Fitzpatrick, J. J. Grefenstette, and D. Van-Gucht*, “Image registration by genetic search,” Proceedings of Southeastcon 84, Louisville, KY, 460–464 (Apr 1984).
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J. M. Fitzpatrick, “A Method for calculating velocity in time dependent images based on the continuity equation,” Proc. IEEE Computer Vision and Pattern Recognition, San Francisco, CA, 78–81 (Jun 1985).
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J. J. Grefenstette and J. M. Fitzpatrick, “Genetic search with approximate function evaluations,” Proc. Intl. Conf. on Genetic Algorithms and their Applications, Pittsburg, PA, 112–120 (Jul 1985).
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D. R. Pickens, J. M. Fitzpatrick, J. J. Grefenstette, R. R. Price, and A. E. James, “A technique for automatic motion correction in DSA,” Proc. Medicine XIV and PACS IV, Newport Beach, CA, 268–274 (Feb 1986).
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J. M. Fitzpatrick, J. J. Grefenstette, D. R. Pickens, M. Mazer, and J. R. Perry, “A system for image registration in digital subtraction angiography,” Tenth International Conference on Information Processing in Medical Imaging, Utrecht, The Netherlands, Jun 1987, eds. C. N. deGraaf and M. A. Viergever, Plenum Press, N.Y., 415–436 (1988).
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J. M. Fitzpatrick, D. R. Pickens, V. R. Mandava*, and J. J. Grefenstette “The reduction of motion artifacts in digital subtraction angiography by geometrical image transformation”, Proc. SPIE Medical Imaging II, Newport Beach, CA 379–386 (Feb 1988).
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D. R. Pickens and J.M. Fitzpatrick, “Phantom design for evaluation of a three-dimensional motion correction algorithm in digital subtraction angiography”, Proc. SPIE Medical Imaging II, Newport Beach, CA, 707–714 (Feb 1988).
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H. Chang* and J. M. Fitzpatrick, “Displaytool: an image display utility for Sun-3 workstations”, Proc. SPIE Medical Imaging II, Newport Beach, CA, 1210–1217 (Feb 1988).
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J. M. Fitzpatrick and C. A. Pedersen*, “A method for calculating fluid flow in time dependent density images”, Proc. Conf. Electronic Imaging, Anaheim, CA, 347–352 (Mar 1988).
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V. R. Mandava* and J. M. Fitzpatrick, “Simulated annealing for motion correction in digital subtraction angiography”, Proc. 10th Annu. Int. Conf. IEEE Eng. Med. Biol. Soc., New Orleans, LA, 435–436 (Nov 1988).
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J. M. Fitzpatrick, D. R. Pickens, J. M. Perry, and Y. Ge*, “Experimental results of image registration in digital subtraction angiography with an in vivo phantom”, Proc. SPIE Medical Imaging III, Newport Beach, CA, 200–213 (Feb 1989).
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J. M. Fitzpatrick, D. R. Pickens, H. Chang*, Y. Ge*, and M. Ozkan*, “Geometrical transformations of density images”, The Internl. Congress on Optical Science and Engineering, SPIE vol. 1137, Paris, France, 12–21 (Apr 1989).
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M. Ozkan*, J. M. Fitzpatrick, and K. Kawamura, “Image registration for a Transputer based distributed system”, Proc. Second Int. Conf. on Indust. & Eng. Appl. of AI & Expert Systems, Tullahoma, TN, 908–915 (Jun 1989).
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H. Chang* and J. M. Fitzpatrick, “Geometrical image transformations to compensate for MRI distortions”, Proc. SPIE Medical Imaging IV, Newport Beach, CA, 116–127 (Feb 1990).
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V. R. Mandava*, R. J. Maciunas, J. M. Fitzpatrick, R. L. Galloway, and C. R. Maurer*, “A workstation platform for stereotactic neurosurgical planning”, Proc. 13th Annu. Int. Conf. IEEE Eng. Med. Biol. Soc., Orlando, FL, 1220–1221 (Nov 1991).
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V. R. Mandava*, J. M. Fitzpatrick, C. R. Maurer*, R. J. Maciunas, and G. S. Allen, “Registration of multimodal volume head images via attached markers”, Proc. SPIE Medical Imaging VI, Newport Beach, CA, Vol. 1652, 271–282 (Feb 1992).
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Y. Ge*, J. Votaw, J. M. Fitzpatrick, R. M. Kessler, R. J. Maciunas, and R. A. Margolin, “Reformatting PET images by direct fitting of the proportional grid system: implementation and validation”, Proc. SPIE Medical Imaging VI, Newport Beach, CA, 397–408 (Feb 1992).
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S. Dong*, J. M. Fitzpatrick, and R. J. Maciunas, “Rectification of distortion in MRI for stereotaxy”, Proc. Fifth Computer-Based Medical Systems Symposium, Durham, NC, 181–189 (Jun 1992).
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R. Maurer*, Jr., J. J. McCrory, J. M. Fitzpatrick, “Estimation of accuracy in localizing externally attached markers in multimodal volume head images”, Proc. SPIE Medical Imaging VII, Newport Beach, CA, 43–54 (Feb 1993).
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Y. Ge*, J. M. Fitzpatrick, J. Bao*, B. M. Dawant, R. M. Kessler, R. A. Margolin, “A new method for identifying cortical convolutions in MR brain images”, Proc. SPIE Medical Imaging 94, Newport Beach, CA, 484–493 (Feb 1994).
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R. Maurer*, Jr., G. B. Aboutanos*, B. M. Dawant, S. Gadamsetty*, R. A. Margolin, R. J. Maciunas, and J. M. Fitzpatrick, “Effect of geometrical distortion correction in MR on image registration accuracy”, Proc. SPIE Medical Imaging 94, Newport Beach, CA, 200–213 (Feb 1994).
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M. Y. Wang*, J. M. Fitzpatrick, C. R. Maurer*, Jr., R. J. Maciunas, “An automatic technique for localizing externally attached markers in MR AND CT volume images of the head”, Proc. SPIE Medical Imaging 94, Newport Beach, CA, 214–224 (Feb 1994).
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Y. Ge*, J. M. Fitzpatrick, R. M. Kessler, M. Jeske-Janicka, R. A. Margolin, “Intersubject brain image registration using both cortical and subcortical landmarks”, Proc. SPIE Medical Imaging 95, San Diego, CA, 81–95 (Feb 1995)
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R. Maurer*, Jr., G. B. Aboutanos*, B. M. Dawant, R. A. Margolin, R. J. Maciunas, J. M. Fitzpatrick, “Registration of CT and MR brain images using a combination of points and surfaces”, Proc. SPIE Medical Imaging 95, San Diego, CA, 109–123 (Feb 1995).
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M. Y. Wang*, J. M. Fitzpatrick, C. R. Maurer*, Jr., “Design of fiducials for accurate registration of CT and MR volume images”, Proc. SPIE Medical Imaging 95, San Diego, CA, 96–108 (Feb 1995)
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R. J. Maciunas, J. M. Fitzpatrick, S. Gadamsetty*, C. R. Maurer*, “A universal method for geometrical correction of magnetic resonance images for stereotactic neurosurgery”, Proc. Amer. Soc. Stereotactic and Functional Neurosurgery, (Mar 1995)
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C. R. Maurer*, Jr., J. M. Fitzpatrick, R. L. Galloway, Jr., M. Y. Wang*, R. J. Maciunas G. S. Allen, “The accuracy of image-guided neurosurgery using implantable fiducial markers”, Proc. Computer Assisted Radiology 9th Intl. Symposium and Exhibition, Berlin, ed. H. U. Lemke, K. Inamura, C. C. Jaffe, M. W. Vannier, Springer-Verlag, Berlin, 1997–1202 (Jun 1995).
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J. West*, J. M. Fitzpatrick, M. Y. Wang*, B. M. Dawant, C. R. Maurer*, Jr., R. M. Kessler, R. J. Maciunas, et al., “Comparison and evaluation of retrospective intermodality image registration techniques”, Proc. SPIE Medical Imaging 96, Newport Beach, CA, vol. 2710, 332–347 (Feb 1996).
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Y. Ge*, C. R. Maurer*, Jr., J. M. Fitzpatrick, “Surface-based 3-D image registration using the iterative closest point algorithm with a closest point transform”, Proc. SPIE Medical Imaging 96, Newport Beach, CA, vol. 2710, 358–367 (Feb 1996).
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M. Y. Wang*, J. M. Fitzpatrick, C. R. Maurer*, Jr, “Partial volume effect on marker localization in medical density images”, Proc. SPIE Medical Imaging 97, Newport Beach, CA, vol. 3034, 580–591 (Feb 1997).
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C. R. Maurer*, Jr., J. M. Fitzpatrick, M. Y. Wang*, R. L. Galloway, Jr., R. J. Maciunas, G. S. Allen, “Registration of head volume images using implantable fiducial markers”, Proc. SPIE Medical Imaging 97, Newport Beach, CA, vol. 3034, 561–579 (Feb 1997).
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J. West*, J. M. Fitzpatrick, M. Y. Wang*, B. M. Dawant, C. R. Maurer*, Jr., R. M. Kessler, R. J. Maciunas, “Retrospective intermodality registration techniques: surface based versus volume-based”, Joint Conference of Computer Vision, Virtual Reality, and Robotics in Medicine and Medical Robotics and Computer Assisted Surgery, Grenoble, France, 151–160 (Mar 1997).
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L. G. Hill, C. R. Maurer*, Jr., M. Y. Wang*, R. J. Maciunas, J. A Barwise, J. M. Fitzpatrick, “Estimation of intraoperative brain surface movement”, Proc. Joint Conference of Computer Vision, Virtual Reality, and Robotics in Medicine and Medical Robotics and Computer Assisted Surgery, Grenoble, France, 449–458 (Mar 1997).
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D. L. G. Hill, C. R. Maurer*, Jr., C. Studholme, J. M. Fitzpatrick, D. J. Hawkes, “Determining scaling errors in radiological images using a nine degree of freedom registration algorithm”, Proc. Medical Image Understanding and Analysis 1997, ed. Taylor, C. J., Noble, J. A., and Brady, J. M., BMVA Press, 41–44 (Jul 1997).
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J. M. Fitzpatrick, J. B. West*, C. R. Maurer*, Jr., “Derivation of expected registration error for rigid-body, point-based, image registration”, Proc. SPIE Medical Imaging 98: Image Processing (Feb 1998), ed. Kenneth M. Hanson, San Diego, CA, vol. 3338, 16–27 (June 24, 1998). doi:10.1117/12.310824
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C. R. Maurer*, Jr., R. J. Maciunas, J. M. Fitzpatrick, “Registration of head CT images to physical space using multiple geometrical features”, Proc. SPIE Medical Imaging 98, San Diego, CA, vol. 3338, 72–80 (Feb 1998).
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J. M. Fitzpatrick, Jay B. West*, “A blinded evaluation and comparison of image registration methods”, Proc. Workshop on Empirical Evaluation Techniques in Computer Vision, University of California at Santa Barbara, IEEE Computer Society Press, Los Alimitos, CA, 12–27 (Jul 1998).
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C. R. Maurer*, Jr., D. Hill, R. J. Maciunas, J. Barwise, J. M. Fitzpatrick, M. Wang*, “Measurement of intraoperative brain surface deformation under a craniotomy”, Medical Image Computing and Computer-Assisted Intervention, Cambridge, MA, 51–62 (Oct 1998).
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J. B. West* and J. M. Fitzpatrick, “The distribution of target registration error in rigid-body, point-based registration”, Sixteenth International Conference on Information Processing in Medical Imaging, Visegrad, Hungary, June 28–July2, 1999, eds. A. Kuba, M. Samal, and A. Todd-Pokropek, Springer-Verlag, 460–465 (July 1999).
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J. B. West*, J. M. Fitzpatrick, “Point-based, rigid registration: clinical validation of theory”, Proc. SPIE Medical Imaging 2000, San Diego, CA, vol. 3979, 353–359 (Feb 2000).
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P. G. Batchelor and J. M. Fitzpatrick, “A study of the anisotropically weighted Procrustes problem”, IEEE Workshop on Mathematical Methods in Biomedical Image Analysis, Hilton Head, SC (Jun 2000).
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J. B. West*, J. M. Fitzpatrick, and P. G. Batchelor, “Point-based registration under a similarity transform”, Proc. SPIE Medical Imaging 2001, San Diego, CA, vol. 4322, 611–622 (Feb 2001).
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D. Skerl, S. Pan, R. Li, J. M. Fitzpatrick, M. H. Parks, P. R. Martin, V. L. Morgan, and B. M. Dawant, “Correction of geometric distortions in EP images using non-rigid registration to corresponding anatomic images”, Proc. SPIE Medical Imaging 2001, San Diego, CA, vol. 4322, 53–68 (Feb 2001).
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D. A. Yoder*, E. Changchien*, C. B. Paschal, and J. M. Fitzpatrick, “MRI simulator with static-field inhomogeneity”, Proc. SPIE Medical Imaging 2002, San Diego, CA, vol. 4684, 592–603 (Feb 2002)
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P. Jannin, N. Ayache, J. M. Fitzpatrick, R. Shahidi, M. W. Vannier, and D. Hawkes, “White paper: Validation of medical image processing in the context of Image-guided therapy”, Special Session on Validation of Medical Image Processing in the Context of Image-Guided Therapy, 6th Ann. Conf. of Intnl. Society for Computer Aided Surgery, Paris (Jun 2002).
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P. G. Batchelor, J. B. West*, J. M. Fitzpatrick, “Scalings and similarity transforms: maximum likelihood estimations”, Proc. of Medical Image Understanding and Analysis 2002 (MIUA 2002), ed. A. Houstin and R. Zwiggelaar, University of Portsmouth, Cosham, UK, July 2002, 129–132 (Jul 2002)
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C. Nickele*, E. Cetinkaya*, J. M. Fitzpatrick, P. E. Konrad, “Evaluation of a method for placing deep-brain stimulators”, Proc. SPIE Medical Imaging 2003, San Diego, CA, vol. 5029, 763–772 (Feb 2003).
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X. Liu*, H. Cevikalp*, J. M. Fitzpatrick, “Marker orientation in fiducial registration”, Proc. SPIE Medical Imaging 2003, San Diego, CA, vol. 5032, 1176–1185 (Feb 2003).
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Z. Cao, S. Pan, R. Li, R. Balachandran*, J. M. Fitzpatrick, W. C. Chapman, B. M. Dawant, “Registration of medical images using an interpolated closest point transform method and validation”, Proc. SPIE Medical Imaging 2003, San Diego, CA, vol. 5032, 325–333 (Feb 2003).
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R. Labadie, M. Fenlon, H. Cevikalp*, S. Harris, R. Galloway, J.M. Fitzpatrick, “Image guided otologic surgery”, Proc. 17th Intnl. Congress and Exhibition, Computer Assisted Radiology and Surgery, London, H.U. Lemke, et al, ed., Elsevier, Intnt. Congress Series 1256, 613–618 (Jun 2003).
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B. M. Dawant, R. Li, E. Cetinkaya, C. Kao, J. M. Fitzpatrick, P. E. Konrad, “Computerized atlas-guided positioning of deep brain stimulators: a feasibility study”, Proc. 2nd Intl. Workshop on Biomedical Image Registration, Philadelphia, J.C. Gee, J.B. Maintz, and M.W. Vannier, ed., Lecture Notes in Computer Science (LNCS) vol. 2717, 142-150 (Jun, 2003).
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W. C. Lavely, C. Scarfone, A. J. Cmelak, W. H. Martin, J. M. Fitzpatrick, R. R. Price, D. E. Hallahan, “An Assessment of Accuracy and Determination of Target Volumes for Radiotherapy Treatment Planning in CT-PET Fusion Images of Patients with Head and Neck Cancer”, 2nd Ann. Mtg. Soc. for Molecular Imaging, San Francisco, (Aug 2003).
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R. F. Labadie, R. J. Shah, S. S. Harris, E. Cetinkaya*, D. S. Haynes, M. Fenlon, S. Juscyzk, R. L. Galloway, J. M. Fitzpatrick. “Image-guided otologic surgery: submillimeter accuracy within the temporal bone”, Ann. Mtg. Am. Academy of Otolaryngology-Head and Neck Surgery, Orlando, FL (Sep 2003).
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R. F. Labadie, P. Choudhury*, E. Cetinkaya*, R. Balachandran*, D. S. Haynes, M. Fenlon, S. Juscyzk, J. M. Fitzpatrick, “Minimally-invasive, image-guided, facial-recess approach to the middle ear”, Mtg. of Am. Otological Soc., Phoenix, AZ (May 2004).
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N. Xu*, D. A. Yoder*, J. M. Fitzpatrick, and C. B. Paschal, “Compensating for MR Distortion Caused by Marker Susceptibility in MR Images”, SPIE Medical Imaging 2004, San Diego, CA, vol. 5370, 1244–1253 (Feb 2004).
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P. D’Haese, E. Cetinkaya*, C. Kao, J. M. Fitzpatrick, P. E. Konrad, and B. M. Dawant, “Toward the Creation of an Electrophysiological Atlas for the Pre-operative Planning and Intra-operative Guidance of Deep Brain Stimulators (DBS) Implantation”, 7th Intl. Conf. on Medical Image Computing and Computer-Assisted Intervention, Saint-Malo, France, Lecture Notes in Computer Science, 3216, Springer (September 2004).
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J. M. Fitzpatrick, R. Balachandran*, and R. F. Labadie, “Bite-Block Relocation Error in Image-Guided Otologic Surgery”, 7th Intl. Conf. on Medical Image Computing and Computer-Assisted Intervention, Saint-Malo, France, Springer Lecture Notes in Computer Science, 3217, 518-525, (September 2004).
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R. Balachandran*, J. M. Fitzpatrick, and R. F. Labadie, “Fiducial registration for tracking systems that employ coordinate reference frames”, Proc. SPIE Medical Imaging 2005, San Diego, CA, vol. 5744, 134–145 (Feb 2005).
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N. Xu*, Y. Li*, C. B. Paschal, J. C. Gatenby, V. L. Morgan, D. R. Pickens, B. M. Dawant, J. M. Fitzpatrick, "Simulation of Susceptibility-Induced Distortions in fMRI", Proc. Medical Imaging 2006, San Diego, CA (Feb 2006).
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Y. Li*, N. Xu*, J. M. Fitzpatrick, V. L. Morgan, D. R. Pickens, B. M. Dawant, "Physics-based Constraints for Correction of Geometric Distortions in Gradient Echo EP images via Nonrigid Registration”, Proc. Medical Imaging 2006, San Diego, CA (Feb 2006).
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R Balachandran*, R. F. Labadie, J. M. Fitzpatrick, “Validation of a fiducial frame system for image-guided otologic surgery utilizing BAHA® bone screws”, IEEE Intnl. Symp. Biomedical Imaging 2006, Arlington, VA (Apr 2006).
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R. Balachandran*, R. F. Labadie, J. M. Fitzpatrick, “Clinical Determination of Target Registration Error of an Image-Guided Otologic Surgical System using Patients with Bone-Anchored Hearing Aids”, Proc. Medical Imaging 2007, San Diego, CA, SPIE 6509-107, 650930 (Feb 2007).
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H. Al-Marzouqi, J. Noble*, F. Warren, R. F. Labadie, J. M. Fitzpatrick, B. M. Dawant, “Planning a safe drilling path for cochlear implantation surgery using image registration techniques”, Proc. Medical Imaging 2007, San Diego, CA, SPIE 6509-110, 650933, 331-339, (Feb 2007).
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J. H. Noble*, F. M. Warren, R. F. Labadie, B. Dawant, J. M. Fitzpatrick, “Determination of drill paths for percutaneous cochlear access accounting for target positioning error”, Proc. Medical Imaging 2007, San Diego, CA, SPIE 6509-76, 650925 (Feb 2007).
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N. Xu*, J. M. Fitzpatrick, “Dynamic field mapping and distortion correction for fMRI”, Proc. Medical Imaging 2007, San Diego, CA, SPIE, 6512-57, 65121M (Feb 2007).
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H. Al-Marzouqi, J. H. Noble*, F. M. Warren, R. F. Labadie, J. M. Fitzpatrick, B. Dawant, “Using CT images to locate a safe drilling path for cochlear implantation surgery”, 2nd Internat, Conf. On Modeling, Simulation and Applied Optimization, AbuDhabi, UAE (Mar 2007).
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R. Balachandran*, J. Mitchell, B. Dawant, J. M. Fitzpatrick, “Evaluation of targeting frames for deep-brain stimulation using virtual targets”, Proc. IEEE Intnl. Symp. Biomedical Imaging 2007, Arlington, VA, 1184-1187 (Apr 2007).
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R. Balachandran*, J. M. Fitzpatrick, “The distribution of registration error of a fiducial marker in rigid-body point-based registration”, Proc. Medical Imaging 2008, San Diego, CA, SPIE 6918-21, 69180M (Feb 2008).
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J. M. Fitzpatrick, “Fiducial registration error and target registration error are uncorrelated”, SPIE Medical Imaging 2009, Lake Buena Vista, FL, SPIE 7261-1, 726102, (Feb 2009).
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C. C. Heath*, R. Balachandran, O. Majdani, A. Jurik, T. Edwards, R. F. Labadie, J. M. Fitzpatrick, “Disablement of a surgical drill via CT guidance to protect vital anatomy”, SPIE Medical Imaging 2009, Lake Buena Vista, FL, SPIE 7261-22, 72610N (Feb 2009).
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R. Balachandran, J. M. Fitzpatrick, “Iterative solution for rigid-body point-based registration with anisotropic weighting”, SPIE Medical Imaging 2009, Lake Buena Vista, FL, SPIE 7261-121, 72613D (Feb 2009).
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Danilchenko*, J. M. Fitzpatrick, “General approach to error prediction in point registration”, SPIE Medical Imaging 2010, February 2010, San Diego, CA, SPIE 7625-14, 76250F (April 2010). DOI: 10.1117/12.843847
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Danilchenko*, A. D. Wiles, R. Balachandran, J. M. Fitzpatrick, “Improved method for point-based tracking”, 13th Intl. Conf. on Medical Image Computing and Computer-Assisted Intervention, September 20-24, 2010, Beijing, China, Lecture Notes in Computer Science (LNCS) 6363, 587-594 (2010). DOI: 10.1007/978 3-642-15711-90
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L. Maier-Hein, M. Schmidt, A. M. Franz, T. R. dos Santos, A. Seitel, B. Jähne, J. M. Fitzpatrick, H. P. Meinzer, “Accounting for anisotropic noise in fine registration of time-of-flight range data with high-resolution surface data”, 13th Intl. Conf. on Medical Image Computing and Computer-Assisted Intervention, September 20-24, 2010, Beijing, China, Lecture Notes in Computer Science (LNCS) 6361, 251-258 (2010). DOI: 10.1007/978 3-642-15705-9
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R. Balachandran, D. Schurzig, J. M. Fitzpatrick, R. F. Labadie, “The Role of Portable CT Scanners in Image-Guided Surgery”, Proc. 24th Intnl. Congress and Exhibition, Computer Assisted Radiology and Surgery, June 23-26, Geneva, H.U. Lemke, et al, ed., (Jun 2010).
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Balachandran R, Mitchell JE, Noble J, Blachon G, Lipscomb WW, Schurzig D, Haynes DS, Bennett ML, Majdani O, Dawant BM, Fitzpatrick JM, Labadie RF. “Percutaneous Cochlear Implantation via Image-Guided Customized Frames.” Robotics Science and Systems 2010: Workshop on Enabling Technologies for Image-Guided Robotic Interventional Procedures, Zaragoza, Spain (2010).
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L. Maier-Hein, T. R. dos Santos, M. Schmidt, A. M. Franz, H. P. Meinzer, J. M. Fitzpatrick, “Iterative closest point algorithm with anisotropic weighting and its application to fine surface registration”, SPIE Medical Imaging 2011, Lake Buena Vista, FL, SPIE 7962-31,79620W (Feb 2011).
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R. Balachandran, J. E. Mitchell, J. Noble, D. Schurzig, G. Blachon, T. R. McRackan, R. J. Webster, B. M. Dawant, J. M. Fitzpatrick, R. F. Labadie, “Insertion of electrode array using percutaneous cochlear implantation technique: a cadaveric study”, SPIE Medical Imaging 2011, Lake Buena Vista, FL, SPIE 7964-49, 79641E (Feb 2011).
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J. M. Fitzpatrick, “Error prediction for probes guided by means of fixtures”, SPIE Medical Imaging 2012, San Diego, CA, SPIE 8316-07 (Feb 2012).
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L. A. Kahrs, G. S. Blachon, R. Balachandran, J. M. Fitzpatrick, R. F. Labadie, “Measurement of distances between anatomical structures using a translating stage with mounted endoscope”, SPIE Medical Imaging 2012, San Diego, CA, SPIE 8316-32 (Feb 2012).
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L. B. Kratchman, J. M. Fitzpatrick, “Robotically-adjustable microstereotactic frames for image-guided neurosurgery”, SPIE Medical Imaging 2013, Lake Buena Vista, FL, SPIE 8671(Feb 2013). DOI: 10.1117/12.2008172
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J. M. Fitzpatrick, “Rigid Point Registration Circuits”, SPIE Medical Imaging 2014, San Diego, CA, SPIE 9036-97 (February 2014).
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N. P. Dillon, R. Balachandran, A. M. dit Falisse, G. B. Wanna, R. F. Labadie, T. J. Withrow, J. M. Fitzpatrick, R J. Webster, “Preliminary Testing of a Compact, Bone-Attached Robot for Otologic Surgery”, SPIE Medical Imaging 2014, San Diego, CA, SPIE 9036-40 (February 2014).
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J. Kobler, J. Díaz, J. M. Fitzpatrick, G. J. Lexow, O. Majdani, T. Ortmaier, “Localization accuracy of sphere fiducials in computed tomography images”, SPIE Medical Imaging 2014, San Diego, CA, SPIE 9036-35 (February 2014).
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M. A. Siebold, N. P. Dillon, R. J. Webster, and J. M. Fitzpatrick, “Incorporating Target Registration Error Into Robotic Bone Milling”, SPIE Medical Imaging 2015, Orlando, FL, SPIE (February 2015).
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