HTS-PEG: a method for high throughput sequencing of the paired-ends of genomic libraries.
Sisi Zhou, Yonggui Fu, Jie Li, Lingyu He, Xingsheng Cai, Qingyu Yan, Xingqiang Rao, Shengfeng Huang, Guang Li, Yiquan Wang, and Anlong Xu
PLoS One, 20 December 2012; 7(12): e52257, 8 pp.
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0052257
The genome of Prunus mume.
Zhang, Qixiang, Wenbin Chen, Lidan Sun, Fangying Zhao, Bangqing Huang, Weiru Yang, Ye Tao, JiaWang, Zhiqiong Yuan, Guangyi Fan, Zhen Xing, Changlei Han, Huitang Pan, Xiao Zhong, Wenfang Shi, Xinming Liang, Dongliang Du, Fengming Sun, Zongda Xu, Ruijie Hao, Tian Lv, Yingmin Lv, Zequn Zheng, Ming Sun, Le Luo, Ming Cai, Yike Gao, Junyi Wang, Ye Yin, Xun Xu, Tangren Cheng & Jun Wang
Nature Communications, 27 December 2012; 3: 1318, 8 pp.
Method for Making Mate-Pair Libraries
Inventors: Feng Chen, Ze Peng, Zhiying Zhao, Nandita Nath, Jeff L. Froula
US Patent Application: 2012/0329678 A1, Publication Date: 27 December 2012;
http://www.freepatentsonline.com/y2012/0329678.html
Engineering industrial Saccharomyces cerevisiae strain with the FLO1 derivative gene isolated from the flocculating yeast SPSC01 for constitutive flocculation and fuel ethanol production.
Lei-Yu He, Xin-Qing Zhao, and Feng-Wu Bai.
Applied Energy, December 2012; 100(C): 33-40.
Structural, serological, and genetic characterization of the O-antigen of Providencia alcalifaciens O40.
Olga G. Ovchinnikova, Bin Liu, Dan Guo, Nina A. Kocharova, Magdalena Bialczak-Kokot, Alexander S. Shashkov, Lu Feng, Antoni Rozalski, Lei Wang, and Yuriy A. Knirel.
FEMS Immunology & Medical Microbiology, December 2012; 66(3): 382-392.
http://femsim.oxfordjournals.org/content/66/3/382.long
From bacterial to microbial ecosystems (metagenomics).
Shannon J. Williamson, and Shibu Yooseph.
Methods Mol Biology, 2012; 804(Bacterial Molecular Networks): 35-55
Comparative studies on Treponema pallidum: comparative genomics of yaws agents and phenomics of BAC clones of syphilis agent.
Darina Čejková
PhD Dissertation, Masaryk University, Brno, Czech Repiblic, 2012; 108 pp.
http://is.muni.cz/th/15880/lf_d/Thesis-final.pdf
2011.
Development of tools for the preparation of genomic libraries for next-generation sequencing.
Aric Joneja.
PhD Theses, 1 January 2011; University of California, San Diego, pp.1-154.
Comparative genomic analysis of bacteriophages specific to the channel catfish pathogen Edwardsiella ictaluri.
Abel Carrias, Timothy J Welch, Geoffrey C Waldbieser, David A Mead, Jeffery S Terhune, Mark R Liles
Virology Journal, 7 January 2011; 8(1): 6, 12 pp.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3025963/
Genomic Architecture of an Adaptive Radiation.
Thomas D. Kocher
Proposal to NSF Evolutionary Processes, University of Maryland, 9 January 2011, 24 pp.
http://wiki.umd.edu/CichlidGenetics/images/7/7a/GenomicArchitecture.pdf
Nucleic acids of Pichia pastoris and use thereof for recombinant production of proteins.
Inventors: Nico Callewaert, Kristof De Schutter, Petra Tiels, Yao-Cheng Lin
US Patent Application: 2011/0021378 A1, Publication Date: 27 January 2011
Switchgrass Promoter and Uses Thereof.
Inventors: C. Neal Stewart, David George, James Mann
US Patent Application: 2011/0023183 A1, Publication Date: 27 January 2011
Distinctive mitochondrial genome of Calanoid copepod Calanus sinicus with multiple large non-coding regions and reshuffled gene order: Useful molecular markers for phylogenetic and population studies.
Wang Minxiao, Sun Song, Li Chaolun and Shen Xin
BMC Genomics, 27 January 2011; 12: 73, 20 pp.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3041745/pdf/1471-2164-12-73.pdf
Extreme Reconfiguration of Plastid Genomes in the Angiosperm Family Geraniaceae: Rearrangements, Repeats, and Codon Usage.
Mary M. Guisinger , Jennifer V. Kuehl, Jeffrey L. Boore and Robert K. Jansen
Molecular Biology and Evolution, January 2011; 28(1): 583-600.
http://mbe.oxfordjournals.org/content/28/1/583.long
Complete plastid genome sequences of three rosids (Castanea, Prunus, Theobroma): evidence for at least two independent transfers of rpl22 to the nucleus.
Robert K. Jansen, Christopher Saski, Seung-Bum Lee, Anne K. Hansen, and Henry Daniell.
Molecular Biology and Evolution, January 2011; 28(1): 835-847.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3108605/
Mining Dictyoglomus turgidum for enzymatically active carbohydrases.
Phillip Brumm, Spencer Hermanson, Becky Hochstein, Julie Boyum, Nick Hermersmann, Krishne Gowda, and David Mead.
Applied Biochemistry and Biotechnology, January 2011; 163(2): 205-214.
https://www.researchgate.net/profile/Phillip_Brumm/publication/45200732_Mining_Dictyoglomus_turgidum_for_enzymatically_active_carbohydrases/links/546b66af0cf2397f7831bea8.pdf
Genomic and molecular analysis of phage CMP1 from Clavibacter michiganensis subspecies michiganensis.
Johannes Wittmann, Karl-Heinz Gartemann, Rudolf Eichenlaub, and Brigitte Dreiseikelmann.
Bacteriophage, January-February 2011; 1(1): 6-14.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3109448/
Neuronal genes for subcutaneous fat thickness in human and pig are identified by local genomic sequencing and combined SNP association study.
Kyung-Tai Lee, Mi-Jeong Byun, Kyung-Soo Kang, Eung-Woo Park, Seung-Hwan Lee, Seoae Cho, HyoYoung Kim, Kyu-Won Kim, TaeHeon Lee, Jong-Eun Park, WonCheoul Park, DongHyun Shin, Hong-Seog Park, Jin-Tae Jeon, Bong-Hwan Choi, Gul-Won Jang, Sang-Haeng Choi, Dae-Won Kim, Dajeong Lim, Hae-Suk Park, Mi-Rim Park, Jurg Ott, Lawrence B. Schook, Tae-Hun Kim, and Heebal Kim
PLoS One, 2 February 2011; 6(2): e16356, 10 pp.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3032728/
Hemicellulases and auxiliary enzymes for improved conversion of lignocellulosic biomass to monosaccharides.
Dahai Gao, Nirmal Uppugundla, Shishir PS Chundawat, Xiurong Yu, Spencer Hermanson, Krishne Gowda, Phillip Brumm, David Mead, Venkatesh Balan, and Bruce E Dale
Biotechnol Biofuels, 22 February 2011; 4(1): 5, 11 pp.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3056733/
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