2016 ifas refereed Journal Publications

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Journal of the American Society for Horticultural Science, 141(5), 527-534.

Capinera, J. L. (2016). Some effects of copper-based fungicides on plant-feeding terrestrial molluscs: A role for repellents in mollusc management. Crop Protection, 83, 76-82.

Cardenas, B., & Dukes, M. D. (2016). Soil moisture sensor irrigation controllers and reclaimed water; Part I: Field-plot study. Applied Engineering in Agriculture, 32(2), 217-224.

Cardenas, B., & Dukes, M. D. (2016). Soil moisture sensor irrigation controllers and reclaimed water; Part II: Residential evaluation. Applied Engineering in Agriculture, 32(2), 225-234.

Cardoso, J., Silva, J. A. T., & Vendrame, W. A. (2016). Impacts of deforestation on some orchids of São Paulo State, Brazil. Brazilian Journal of Nature Conservation, 14(1), 28-32.

Carnohan, L. P., Kaufman, P. E., Allan, S. A., Gezan, S. A., & Weeks, E. N. (2016). Laboratory and field evaluation of brown dog tick behavioral responses to potential semiochemicals. Ticks and Tick-borne Diseases, 8(2), 226-234.

Carrijo, T. F., Constantini, J. P., & Scheffrahn, R. H. (2016). Uncitermes almeriae, a new termite species from Amazonia (Isoptera, Termitidae, Syntermitinae). ZooKeys, 595, 1-6.

Carrillo, C. I. C., Funderburk, J., & Snyder, W. E. (2016). Thrips (Thysanoptera) collected from Solanum dulcamara (Solanales: Solanaceae) in Washington and Idaho. Florida Entomologist, 99(2), 306-307.

Carrillo, D., Cruz, L. F., Kendra, P., Narvaez, T., Montgomery, W., Monterroso, A., De Grave, C., & Cooperband, M. (2016). Distribution, Pest Status and Fungal Associates of Euwallacea nr. fornicatus in Florida Avocado Groves. Insects, 7(4), 55.

Carroll, R. K., Weiss, A., Broach, W. H., Wiemels, R. E., Mogen, A. B., Rice, K. C., & Shaw, L. N. (2016). Genome-wide annotation, identification, and global transcriptomic analysis of regulatory or small RNA gene expression in Staphylococcus aureus. mBio, 7(1), e01990.

Carson, L., Ozores-Hampton, M., & Morgan, K. (2016). Correlation of petiole sap nitrate-nitrogen concentration measured by ion selective electrode, leaf tissue nitrogen concentration, and tomato yield in Florida. Journal of Plant Nutrition, 39(12), 1809-1819.

Carvalho, E. R., Martins, T., Lamb, G. C., & Vasconcelos, J. L. M. (2016). Ovulation time in suckled beef cows is anticipated by use of low doses of progesterone and temporary calf removal on fixed timed AI protocol. Theriogenology, 86(9), 2238-2243.

Carvalho, R. F., Carvalho, S. D., O’Grady, K., & Folta, K. M. (2016). Agroinfiltration of Strawberry Fruit—A Powerful Transient Expression System for Gene Validation. Current Plant Biology, 6, 19-37.

Carvalho, S. D., Chatterjee, M., Coleman, L., Clancy, M. A., & Folta, K. M. (2016). Analysis of Block of cell proliferation 1 (BOP1) activity in strawberry and Arabidopsis. Plant Science, 245, 84-93.

Carvalho, S. D., Schwieterman, M. L., Abrahan, C. E., Colquhoun, T. A., & Folta, K. M. (2016). Light Quality Dependent Changes in Morphology, Antioxidant Capacity, and Volatile Production in Sweet Basil (Ocimum basilicum). Frontiers in Plant Science, 7(14), doi: 10.3389/fpls.2016.01328.

Casaburi, G., Duscher, A. A., Reid, R. P., & Foster, J. S. (2016). Characterization of the stromatolite microbiome from Little Darby Island, The Bahamas using predictive and whole shotgun metagenomic analysis. Environmental Microbiology, 18(5), 1452-1469.

Casalla, R., Scheffrahn, R. H., & Korb, J. (2016). Proneotermes macondianus, a new drywood termite from Colombia and expanded distribution of Proneotermes in the Neotropics (Isoptera, Kalotermitidae). ZooKeys, 23, 43-60.

Casalla, R., Scheffrahn, R., & Korb, J. (2016). Cryptotermes colombianus a new drywood termite and distribution record of Cryptotermes in Colombia. ZooKeys, 596, 39-52.

Casamali, B., Darnell, R. L., Kovaleski, A. P., Olmstead, J. W., & Williamson, J. G. (2016). Vegetative and Reproductive Traits of Two Southern Highbush Blueberry Cultivars Grafted onto Vaccinium arboreum Rootstocks. Hortscience, 51(7), 880-886.

Casamali, B., Williamson, J. G., Kovaleski, A. P., Sargent, S. A., & Darnell, R. L. (2016). Mechanical Harvesting and Postharvest Storage of Two Southern Highbush Blueberry Cultivars Grafted onto Vaccinium arboreum Rootstocks. Hortscience, 51(12), 1503-1510.

Casey, S. T., Cohen, M. J., Acharya, S., Kaplan, D. A., & Jawitz, J. W. (2016). Hydrologic controls on aperiodic spatial organization of the ridge-slough patterned landscape. Hydrology and Earth System Sciences, 20(11), 4457-4467.

Cassini, A., Hathaway, S., Havelaar, A., Koopmans, M., Koutsoumanis, K., Messens, W., Muller-Seitz, G., Nørrung, B., Rizzi, V., & Scheutz, F. (2016). Microbiological risk assessment. EFSA Journal, 14(S1), s0507.

Cattau, C. E., Fletcher, R. J., Reichert, B. E. & Kitchens, W. M. (2016). Counteracting effects of a non-native prey on the demography of a native predator culminate in positive population growth. Ecological Applications, 26(7), 1952-1968.

Caughlin, T. T., Graves, S. J., Asner, G. P., van Breugel, M., Hall, J. S., Martin, R. E., Ashton, M. S., & Bohlman, S. A. (2016). A hyperspectral image can predict tropical tree growth rates in single-species stands. Ecological Applications, 26(8), 2367-2373.

Caughlin, T. T., Rifai, S. W., Graves, S. J., Asner, G. P., & Bohlman, S. A. (2016). Integrating LiDAR ‐derived tree height and Landsat satellite reflectance to estimate forest regrowth in a tropical agricultural landscape. Remote Sensing in Ecology and Conservation, 190-203.

Cervantes, A., Muhammad, I., Gonzalez, C., Vyas, D., & Adesogan, A. (2016). 1625 Expression and purification of a novel bacterial expansin from that synergistically degrades cellulose with fibrolytic enzymes. Journal of Animal Science, 94(5), 791. doi:10.2527/jam2016-1625

Cestari, C., Loiselle, B. A., & Pizo, M. A. (2016). Trade-offs in male display activity with lek size. PLoS ONE, 11(9), e0162943.

Chakrabarti, S., Judge, J., Bongiovanni, T., Rangarajan, A., & Ranka, S. (2016). Disaggregation of Remotely Sensed Soil Moisture in Heterogeneous Landscapes Using Holistic Structure-Based Models. IEEE Transactions on Geoscience and Remote Sensing, 54(8), 4629-4641.

Chamorro, M. P., Mertely, J. C., Seijo, T. E., & Peres, N. A. (2016). First report of Bipolaris drechsleri causing a leaf spot of Cuphea llavea in Florida. Plant Disease, 100(7), 1502.

Chamorro, M. P., Seijo, T. E., Noling, J. C., De los Santos, B., & Peres, N. A. (2016). Efficacy of fumigant treatments and inoculum placement on control of Macrophomina phaseolina in strawberry beds. Crop Protection, 90, 163-169.

Chang, S., Graham, W., Hwang, S., & Muñoz-Carpena, R. (2016). Sensitivity of future continental United States water deficit projections to general circulation models, the evapotranspiration estimation method, and the greenhouse gas emission scenario. Hydrology and Earth System Sciences, 20(8), 3245-3261.

Chang, Y. K., Zaman, Q. U., Farooque, A., Chattha, H., Read, S., & Schumann, A. (2016). Sensing and control system for spot-application of granular fertilizer in wild blueberry field. Precision Agriculture, 18(2), 210-223.

Chapman, P. A., Traub, R. J., Kyaw-Tanner, M. T., Owen, H., Flint, M., Cribb, T. H., & Mills, P. C. (2016). Terminal Restriction Fragment Length Polymorphism for the Identification of Spirorchiid Ova in Tissues from the Green Sea Turtle, Chelonia mydas. PLoS ONE, 11(8), e0162114.

Chapman, P., Owen, H., Flint, M., Traub, R., Cribb, T., & Mills, P. (2016). Molecular Characterization of Coccidia Associated with an Epizootic in Green Sea Turtles (Chelonia mydas) in South East Queensland, Australia. PLoS ONE, 11(2), e0149962.

Chaubey, I., Bosch, D., Muñoz-Carpena, R., Harmel, R. D., Douglas-Mankin, K. R., Nejadhashemi, A., Srivastava, P., & Shirmohammadi, A. (2016). Climate change: A call for adaptation and mitigation strategies. Transactions of the ASABE, 59(6), 1709-1713.

Chavez, D. J., Beckman, T. G., & Chaparro, J. X. (2016). Identifying the North American Plum Species Phylogenetic Signal Using Nuclear, Mitochondrial, and Chloroplast DNA Markers. Journal of the American Society for Horticultural Science, 141(6), 623-644.

Chavez, E., He, Z. L., Stoffella, P. J., Mylavarapu, R. S., Li, Y. C., & Baligar, V. C. (2016). Chemical speciation of cadmium: An approach to evaluate plant-available cadmium in Ecuadorian soils under cacao production. Chemosphere, 150, 57-62.

Chavez, E., He, Z., Stoffella, P., Mylavarapu, R., Li, Y., & Baligar, V. (2016). Evaluation of soil amendments as a remediation alternative for cadmium-contaminated soils under cacao plantations. Environmental Science and Pollution Research, 23(17), 17571-17580.

Chen, D., Gao, B., Wang, H. Y., & Yang, K. (2016). Effective removal of high concentration of phosphate by starch-stabilized nanoscale zerovalent iron (SNZVI). Journal of the Taiwan Institute of Chemical Engineers, 61, 181-187.

Chen, N., Dempere, L. A., & Tong, Z. (2016). Synthesis of pH-Responsive Lignin-Based Nanocapsules for Controlled Release of Hydrophobic Molecules. ACS Sustainable Chemistry & Engineering, 4(10), 5204-5211.

Chen, N., Zhu, J., & Tong, Z. (2016). Fabrication of microfibrillated cellulose gel from waste pulp sludge via mild maceration combined with mechanical shearing. Cellulose, 23, 2573-2583.

Chen, X. L., Bordini, G. P., & Stansly, P. A. (2016). Avoidance of parasitized hosts by female wasps of Tamarixia radiata (Hymenoptera: Eulophidae), parasitoid of Diaphorina citri (Hemiptera: Liviidae), vector of citrus greening disease. Florida Entomologist, 99(2), 311-313.

Chen, X. L., Wong, S. W. K., & Stansly, P. A. (2016). Functional Response of Tamarixia radiata (Hymenoptera: Eulophidae) to Densities of Its Host, Diaphorina citri (Hemiptera: Psylloidea). Annals of the Entomological Society of America, 109(3), 432-437.

Chen, X. Q., Gao, Z. F., House, L., Ge, J. J., Zong, C. F., & Gmitter, F. (2016). Opportunities for Western Food Products in China: The Case of Orange Juice Demand. Agribusiness, 32(3), 343-362.

Chen, X., Mao, X. Y., Lu, Q., Liao, Z. W., & He, Z. L. (2016). Characteristics and mechanisms of acrylate polymer damage to maize seedlings. Ecotoxicology and Environmental Safety, 129, 228-234.

Chen, Z., Hagen, D. E., Wang, J., Elsik, C. G., Ji, T., Siqueira, L. G., Hansen, P. J., & Rivera, R. M. (2016). Global assessment of imprinted gene expression in the bovine conceptus by next generation sequencing. Epigenetics, 11(7), 501-516.

Cheng, Z., Gao, B., Xu, H. X., Sun, Y. Y., Shi, X. Q., & Wu, J. C. (2016). Effects of surface active agents on DNAPL migration and distribution in saturated porous media. Science of the Total Environment, 571, 1147-1154.

Cherry, R., Karounos, M., & Sakr, B. (2016). Rice Water Weevil (Coleoptera: Curculionidae) Damage in Florida Rice Fields. Journal of Entomological Science, 51(3), 219-225.

Chevasco, E. D., Minogue, P. J., Mackowiak, C., & Comerford, N. B. (2016). Fertilization and pine straw raking in slash pine plantations: P removals and effects on total and mobile soil, foliage and litter P pools. Forest Ecology and Management, 376, 310-320.

Childers, C. C., Ebert, T. A., Rogers, M. E., & Shepard, M. (2016). The occurrence and distribution of Tuckerella japonica (Acari: Tuckerellidae) on tea bushes, Camellia sinensis and C. assamica, in Alabama, Georgia and South Carolina, USA. Experimental and Applied Acarology, 69(4), 479-486.

Cho, A. H., Chase, C. A., Koenig, R. L., Treadwell, D. D., Gaskins, J., Morris, J. B., & Morales-Payan, J. P. (2016). Phenotypic Characterization of 16 Accessions of Sunn Hemp in Florida. Agronomy Journal, 108(6), 2417-2424.

Cho, A. H., MacDonald, G. E., Tillman, B. L., Kemerait, R. C., Rowland, D. L., Sammons, D. J., Williams, J. H., & Sargent, S. A. (2016). Evaluation of peanut genotypes for foliar disease resistance and yield in Guyana and Florida. International Journal of Tropical Agriculture, 34(5), 1277-1286.

Cho, A. H., MacDonald, G. E., Williams, J. T., & Isele, E. D. (2016). Peanut farming in the rural interior of Guyana. Renewable Agriculture and Food Systems, 31(1), 9-11.

Cho, S. H., Mountain, T. P., Porto, N., Kiss, D. E., Gutter, M. S., & Griesdorn, T. (2016). Experimental design to understand the student loan decision: A methodological note. Family and Consumer Sciences Research Journal, 45(1), 65-76.

Choi, D., Lee, W. S., Ehsani, R., Schueller, J., & Roka, F. M. (2016). Detection of dropped citrus fruit on the ground and evaluation of decay stages in varying illumination conditions. Computers and Electronics in Agriculture, 127, 109-119.

Chouvenc, T., Scheffrahn, R. H., & Su, N.-Y. (2016). Establishment and spread of two invasive subterranean termite species (Coptotermes formosanus and C. gestroi; Isoptera: Rhinotermitidae) in metropolitan southeastern Florida (1990–2015). Florida Entomologist, 99(2), 187-191.

Chow, V., Kim, Y. S., Rhee, M. S., Sawhney, N., St John, F. J., Nong, G., Rice, J. D., & Preston, J. F. (2016). A 1,3-1,4-beta-Glucan Utilization Regulon in Paenibacillus sp Strain JDR-2. Applied and Environmental Microbiology, 82(6), 1789-1798.

Christie, M. E., Parks, M., & Mulvaney, M. (2016). Gender and local soil knowledge: Linking farmers' perceptions with soil fertility in two villages in the Philippines. Singapore Journal of Tropical Geography, 37(1), 6-24.

Chu, C. C., Gill, T. A., Hoffmann, M., & Pelz-Stelinski, K. S. (2016). Inter-Population Variability of Endosymbiont Densities in the Asian Citrus Psyllid (Diaphorina citri Kuwayama). Microbial Ecology, 71(4), 999-1007.

Ciriaco, F. M., Henry, D. D., Mercadante, V. R. G., Schulmeister, T. M., Ruiz-Moreno, M., Lamb, G. C., & DiLorenzo, N. (2016). Effects of molasses and crude glycerol combined in a liquid supplement on ruminal fermentation in beef steers consuming bermudagrass hay. Journal of Animal Science, 94(9), 3851-3863.

Clark, K. L., Branch, L. C. Hierro, J. L., & Villarreal, D. (2016). Burrowing herbivores alter soil carbon and nitrogen dynamics in semi-arid scrub. Soil Biology and Biochemistry, 103, 253-261.

Clarke, T., Espinoza, M., Ahrens, R., & Wehrtmann, I. (2016). Elasmobranch bycatch associated with the shrimp trawl fishery off the Pacific coast of Costa Rica, Central America. Fishery Bulletin, 114(1), 1-17.

Clerici, N., Rubiano, K., Abd-Elrahman, A., Posada Hoestettler, J. M., & Escobedo, F. J. (2016). Estimating aboveground biomass and carbon stocks in periurban Andean secondary forests using very high resolution imagery. Forests, 7(7), Article 138.

Cluever, J. D., Smith, H. A., Nagle, C. A., Funderburk, J. E., & Frantz, G. (2016). Effect of insecticide rotations on density and species composition of thrips (Thysanoptera) in Florida strawberry (Rosales: Rosaceae). Florida Entomologist, 99(2), 203-209.

Coffey, R., & Knutson, M. (2016). The plasma membrane metal-ion transporter ZIP14 contributes to non-transferrin-bound iron uptake by human β cells. American Journal of Physiology - Cell Physiology, 312(2), C169-C175.

Cohen, M. J., Creed, I. F., Alexander, L., Basu, N. B., Calhoun, A. J. K., Craft, C., D'Amico, E., DeKeyser, E., Fowler, L., Golden, H. E., Jawitz, J. W., Kalla, P., Kirkman, L. K., Lane, C. R., Lang, M., Leibowitz, S. G., Lewis, D. B., Marton, J., McLaughlin, D. L., Mushet, D. M., Raanan-Kiperwas, H., Rains, M. C., Smith, L., & Walls, S. C. (2016). Do geographically isolated wetlands influence landscape functions? Proceedings of the National Academy of Sciences of the United States of America, 113(8), 1978-1986.

Collins, S. D., Shukla, S., & Shrestha, N. K. (2016). Drainage ditches have sufficient adsorption capacity but inadequate residence time for phosphorus retention in the Everglades. Ecological Engineering, 92, 218-228.

Collins, T. D., Collins, E. L., Lam, B. K., Mishra, S., & Larkin, J. (2016). AI-10 A mimetic peptide of suppressor of cytokine signalling-1 ameliorates lupus pathology in a spontaneous mouse model. Lupus Science & Medicine, 3(1), A5.

Collins, T. D., Lam, B. K., Mohamed, Z. S., Mishra, S., & Larkin, J. (2016). Interferon-gamma signaling inhibition by a suppressor of cytokine signaling-1 (SOCS-1) mimetic peptide ameliorates lupus pathology in a spontaneous mouse model. Journal of Immunology, 196(1), 210.216.

Colon, B., & Toor, G. S. (2016). A review of uptake and translocation of pharmaceuticals and personal care products by food crops irrigated with treated wastewater. Advances in Agronomy, 140, 75-100.

Conesa, A., Madrigal, P., Tarazona, S., Gomez-Cabrero, D., Cervera, A., McPherson, A., Szczesniak, M. W., Gaffney, D. J., Elo, L. L., Zhang, X. G., & Mortazavi, A. (2016). A survey of best practices for RNA-seq data analysis. Genome Biology, 17, Article 13.

Confalonieri, R., Bregaglio, S., Adam, M., Ruget, F., Li, T., Hasegawa, T., Yin, X. Y., Zhu, Y., Boote, K., Buis, S., Fumoto, T., Gaydon, D., Lafarge, T., Marcaida, M., Nakagawa, H., Ruane, A. C., Singh, B., Singh, U., Tang, L., Tao, F. L., Fugice, J., Yoshida, H., Zhang, Z., Wilson, L. T., Baker, J., Yang, Y. B., Masutomi, Y., Wallach, D., Acutis, M., & Bouman, B. (2016). A taxonomy-based approach to shed light on the babel of mathematical models for rice simulation. Environmental Modelling & Software, 85, 332-341.

Connelly, C. R., Alto, B. W., & O'Meara, G. F. (2016). The spread of Culex coronator (Diptera: Culicidae) throughout Florida. Journal of Vector Ecology, 41(1), 195-199.

Conner, N. W., Roberts, T. G., & Sterns, J. (2016). An exploration of the cultural adaptation process during an international experience in France. Journal of International Agricultural and Extension Education, 23(3), 58-71.

Cooke, S. J., Allison, E. H., Beard, T. D., Arlinghaus, R., Arthington, A. H., Bartley, D. M., Cowx, I. G., Fuentevilla, C., Leonard, N. J., Lorenzen, K., Lynch, A. J., Nguyen, V. M., Youn, S. J., Taylor, W. W., & Welcomme, R. L. (2016). On the sustainability of inland fisheries: Finding a future for the forgotten. Ambio, 45(7), 753-764.

Cooper, T. M., & Cave, R. D. (2016). Effect of temperature on growth, reproductive activity, and survival of an invasive bromeliad-eating weevil, Metamasius callizona (Coleoptera: Curculionidae). Florida Entomologist, 99(3), 5.

Cooperband, M. F., Stouthamer, R., Carrillo, D., Eskalen, A., Thibault, T., Cossé, A. A., Castrillo, L. A., Vandenberg, J. D., & Rugman-Jones, P. F. (2016). Biology of two members of the Euwallacea fornicatus species complex (Coleoptera: Curculionidae: Scolytinae), recently invasive in the U.S.A., reared on an ambrosia beetle artificial diet.

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