Eastern Region Science Plan Introduction



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Actions: The forthcoming summary document from a New England workshop could be used as a basis for prioritizing research activities. These priorities must include consideration of 1) programmatic priorities, 2) scientific merit, 3) customer needs, 4) interdisciplinary collaboration, and 5) partnership development. Consideration must also be given to the uniqueness of the work and the potential for more work of the same type. Is there the necessary scientific and database infrastructure in place for the work? If not, then is this a new scientific direction that is worthy of the necessary infrastructure investment? Also, is the outcome assured? If not, is the effort worth the risk? High risk research should be undertaken if the potential payoff is high. There are two primary areas in the Eastern US where this work could take place:


  1. Coastal North Carolina – based on draft Action Plan, July 2002. Further development of the Action Plan within the USGS is occurring and will likely provide useful guidance for future work.

  2. Coastal New England – based on workshop held in early January 2003. The results of this workshop are being prepared and are also likely to provide useful guidance for future work.

Ongoing efforts that are high priorities for coastal and river studies include:

  1. Gulf of Mexico

  2. Mississippi River

  3. Great Lakes

In order to successfully move forward, these three efforts require:

  • Development of standardized, interdisciplinary databases

  • Strong interdisciplinary science leadership and direction that is well supported

  • A cogent plan for integrated science implementation



  • Urban expansion and land use change


Issues: Population growth and migration patterns are recognized drivers of human-induced land surface change. Since the 1960s, the population of the United States has increased from 179 to 281 million with the U.S. Census Bureau projecting a population of 383 million by the year 2050. This increase will lead to significant changes in land use that will have major consequences on ecosystem health and sustainability. Increased national affluence, combined with ease of movement, is generating a population shift that will have an impact on some of our most critical and currently undisturbed ecosystems as migration increases from urban to rural communities. New tools, methodologies, and interdisciplinary approaches must be developed to strengthen the capacity to assess the sustainability of ecosystems and to understand the potential consequences of urban expansion. An improved interdisciplinary understanding of the causes and mechanisms that underlie current and past land surface changes is required to develop an ability to predict future changes.

Actions: To evaluate the complex interrelationships between urban expansion in the Eastern Region and its impact upon landscape characteristics requires a multi-pronged approach. The science and technological objectives will focus on the following priorities:

  • Select several urban locations within the Eastern Region, chosen by a multidisciplinary team for their applicability for integrated science issues. Map the extent of urban development around these centers and the condition of the surrounding land surface at multiple spatial and temporal scales. Monitor and document changes in the land surface to determine how physical alterations of habitats influence biodiversity, habitat integrity, and contaminant flux and water availability.

  • Using selected urban study areas, identify the major anthropogenic forces driving urban growth and sprawl development. Identify episodes of combined driving forces that have specific spatial and temporal signatures and incorporate them into urban growth models.

  • Develop criteria and indicators of land surface condition. Develop remote sensing and field techniques to improve the accuracy and efficiency of characterizing the geologic and biotic properties of the landscape, as well as the study of ecosystem structure and function.

  • Advance the use and technical development of GIS and three-dimensional visualization as tools for landscape assessment and for incorporating spatial data into geologic, hydrologic and biologic modeling processes.

  • Develop GIS-based decision support tools that integrate earth science information and economics in order to model complex human and natural systems related to specific environmental flux or risk issues. Develop community-based participatory procedures that involve scientists, citizens, stakeholders, and users. Determine the usefulness of science in land management decision-making.


II. Ecosystem and Natural Resources– Understanding natural variation and human-induced change





  • Climate change

Issues: Climate change is normal, and has the potential for significantly impacting society and ecosystems. It can occur rapidly (<10 yrs) or slowly (>100+ yrs); it can be minor or substantial; and it can occur frequently or infrequently. Because ecosystems depend on climate, ecosystems change as climate changes. Scientists have documented climate change on scales of hundreds, thousands, and millions of years. Since the processes that cause climate change are not well understood, it is still very difficult to distinguish natural from human-induced climate change. However, understanding the magnitude and variability of potential climate change (whether natural or human-induced) is necessary to enable society to adapt to potential change. Reliable assessments of past climate changes and subsequent ecosystem changes are based on studies of the sediment and rock record and their contained fossils, and geochemistry.

General climate change issues for the USGS to study in the Eastern Region include:



  • Documenting past climate and ecosystem changes from sediment and rock records (on land, estuaries, coastal, and off-shore, including linkages between on- and off-shore)

  • Understanding the processes that cause climate change and their thresholds

  • Understanding the potential effects of climate change on the landscape, hydrologic cycles, ecosystems, and society

Specific effects of climate change that could affect the Eastern Region include:

  • Sea-level rise and impact on coastal/nearshore resources

  • Lake-level changes (Great Lakes and others)

  • Precipitation changes in amounts, frequency, and seasonality, affecting stream water flow, and the ground water table

  • Seasonal temperature variation and magnitude changes

  • Increased numbers of rare weather events – including droughts, floods, storms, heat waves, cold waves, hurricanes etc

  • Effects of climate change and the implications for management of public lands,

  • Stressed or changing ecosystems

  • The cost and ability of society to adjust to climate change

  • The potential importance of gas hydrates (methane) as a driver of climate change

Actions: Major actions necessary to study climate change in the Eastern Region include the following:

  • Focus studies on areas with high sensitivity to climate processes, ecosystems vulnerable to climate forcing (by fresh-water flow, precipitation, temperature, coastal processes, nutrient and sediment flux), and high-resolution paleoclimate records, documented using long, continuous sediment cores, especially Holocene records. Initial research focus areas could include, but are not limited to Chesapeake Bay, Lake Champlain, the Great Lakes, Tampa Bay, the Gulf of Mexico, South Florida.

  • Integrate patterns of climate variability patterns with biological response through biological research and monitoring programs on endangered species, biodiversity, habitat vulnerability, water resources research on hydrological variability, and geographic research on land use change and its impacts (including impacts on regional climate).

  • Link on-shore and off-shore sediment core records; understanding the processes of erosion and deposition in different settings; determining corresponding ecosystem history.

  • Understand the earth’s natural systems as they drive climate change and the resiliency of these systems to natural and human-induced impacts, especially at the on-set and offset of recent climatic changes such as the little ice age, and the Younger Dryas.

  • Establish partnerships with one or more climate modeling groups (i.e. Penn State University, NASA-GISS, others) to conduct model-date simulations and evaluate future change.




  • Fish and Wildlife Health

Issues: Disease is a natural part of every ecosystem. The health of fish and wildlife populations may be compromised by contact with naturally occurring pathogenic bacteria, fungi, viruses, protozoa, toxic algae, and a variety of parasites. Susceptibility to disease may be increased when populations expand and competition for space and food is increased. The development and spread of new and emerging diseases in fish and wildlife may also result when human activities degrade water, soil, and air quality. Eutrophication, contaminants, pesticides, and changing climate may cause or exacerbate disease. Altered habitats encourage the proliferation of invasive and nuisance species, some of which may be disease carriers. The spread of pathogens and parasites among domesticated livestock, pets, and wildlife is an increasing risk as a result of the fragmentation of natural habitats and urbanization. Hatchery fishes may transmit diseases to wild stocks in marine and freshwaters. The widespread use of antibiotics and drugs to treat farm animals and in aquaculture operations may create strains of resistant microorganisms with increased pathogenic potential to wild stocks and other species. The increased transportation and movement of people, plants, animals and materials worldwide, whether intentional or accidental, is increasing the likelihood of spreading existing diseases and the emergence of new wildlife health risks. The most vulnerable taxa may be threatened, endangered, and rare species that have limited genetic resiliency and lack disease resistance.

A paramount goal is the prevention and control of fish and wildlife diseases among native fish and wildlife populations, especially threatened and endangered species. Also needed, is the rapid detection of new and emerging diseases, including new molecular and genetic technologies to characterize pathogens and to understand the physiological and genetic basis of disease resistance. Improved methods are needed for the monitoring of existing and emerging diseases, and understanding the causes and consequences of disease spread to fish and, wildlife populations. A better understanding is needed on the role of natural and anthropogenic stressors in disease occurrence and severity in coral reefs, including the potential synergistic effects of multiple stressors. Hydrologic and geomorphic features should be tested for correlations with disease occurrence and spread. Significant disease threats to fish and wildlife currently include West Nile virus, avian vacuolar myelinopathy, chronic wasting disease, avian cholera, foot and mouth disease, diseases of amphibians and corals, the Pfiesteria/Aphanomyces complex, Mycobacteria, and antibiotic resistant microbes.



Actions: There are immediate needs for increased funding that can bring multi-disciplinary approaches to disease research related to:

  • Expansion of existing studies by USGS Biology, Mapping, and the Centers for Disease Control (CDC) that are evaluating and forecasting the spread and threat of West Nile virus among multiple species.

  • Improve the early detection, accuracy, speed, and capacity of diagnostic tests for chronic wasting disease and develop a Geographical Information System (GIS) that can explain and model disease dispersal and patterns of disease/host interactions.

  • Developing vaccines for WNV and other disease agents, followed by mapping, GIS and modeling techniques to measure their effectiveness among impacted species and landscapes.

  • Understanding and modeling the potential threat, introduction, and spread of foot and mouth disease.

  • Threats of disease transmission and spread to natural populations resulting from artificial propagation and restocking of fish and wildlife populations.

  • Efforts to identify, understand, and mitigate causes of disease in corals in Florida and the Virgin Islands as outlined in the draft USGS Coral Reef Strategic Plan. Biologists and geologists need to collaborate on techniques to identify physiological stress and impairment in corals, as early warning signs prior to disease manifestation.

Investigators are encouraged to work with partners to incorporate social and economic information into the knowledge base for the management and control of existing and emerging diseases in fish and wildlife.


  • Eutrophication and hypoxia

Issue: Eutrophication of streams, lakes, estuaries, and coastal areas is one of the greatest threats to the integrity of aquatic and marine communities, and the problem is growing throughout the eastern U.S. Nutrients are vital to plant growth, but in excess, nutrients such as nitrate and phosphorous may cause significant water quality degradation by stimulating photosynthetic growth. Eutrophication occurs when a body of water is enriched with organic material as a result of enhanced growth of plants. Overabundance of algae can reduce oxygen levels, leading to hypoxia or anoxia, and the creation of dead zones where low oxygen levels are harmful to fish and shellfish. Certain forms of nitrogen are toxic to humans and other animals.

Sources of excess nutrients include runoff from fertilized lawns and croplands, wastewater plants, septic systems, animal feedlot operations, industrial discharges, and atmospheric deposition from burning fossil fuels. Synthetic inorganic fertilizers and the burning of fossil fuels account for the major component of nutrient input to receiving waters. In marine ecosystems, nitrogen is of primary importance in both causing and controlling eutrophication, while eutrophication in freshwater systems is largely due to excess phosphorous. Impacts of eutrophication include loss of biodiversity, harmful algal blooms, fish kills, shellfish poisoning, loss of submerged aquatic vegetation, and destruction of coral reefs. Particular attention has been focused on hypoxia in the Gulf of Mexico and the role that nutrient loads, particularly nitrate, originating from the upper Mississippi River Basin play in sustaining the hypoxia. Another relatively severe problem area is the mid-Atlantic coast. As described by the National Research Council (2000), understanding and preventing nutrient over-enrichment is extremely difficult. Nutrients are contributed from multiple, mostly non-point sources. The complexity of nutrient sources, fates and effects, coupled with associated socioeconomic and political issues of broad geographic scope, will require the participation of an extremely varied group of stakeholders in finding solutions through a long-term adaptive process.



Much remains to be learned about the geographic extent and severity of eutrophication, understanding thresholds of response to excess nutrients in large and small systems, and developing nutrient control strategies. A comprehensive, strategy of adaptive management, monitoring, and research is required to understand, predict and control eutrophication. An interdisciplinary management team is currently in place that is looking to coordinate the efforts of the USGS on the nutrient issues in the Upper Mississippi River basin. In addition, there is a federal Interagency Hypoxia Taskforce that has developed plans for study for the Gulf of Mexico hypoxia issues.

Actions: Integrated, multidisciplinary USGS efforts are needed in combination with shared the budgets and complementary science plans of other Federal and State partners in order to:

  • Implement consistent standards of data collection, quality control, data management, and information dissemination

  • Integrate aquatic nutrient data between USGS Water and Biology disciplines

  • Develop accurate estimates of nutrient inputs to lakes, rivers, wetlands, estuaries, and coasts

  • Understand nutrient transformation and flux within and between sediments and overlying waters

  • Investigate the effects of modified hydrology (including flood-plain connectivity) on nitrogen removal and phosphorus retention along the rivers

  • Assess the impacts of agricultural practices on nitrogen dynamics in surrounding river basins, with special attention to karst landscapes
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