26, 909-915. (doi: 10. 1038/nbt. 1482) Abrahamsen ms, Templeton tj, Enomoto S, Abrahante je, Zhu G, Lancto ca, Deng M, Liu C, Widmer G, Tzipori s et al. 2004 Complete genome sequence of the apicomplexan, Cryptosporidium parvum. Science 304



Download 0.51 Mb.
Page1/6
Date20.10.2016
Size0.51 Mb.
#5512
  1   2   3   4   5   6
References for Genomic Parameters

  1. Abad P, Gouzy J, Aury J-M, Castagnone-Sereno P, Danchin EGJ, Deleury E, Perfus-Barbeoch L, Anthouard V, Artiguenave F, Blok VC et al. 2008 Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nat. Biotech. 26, 909-915. (doi: 10.1038/nbt.1482)

  2. Abrahamsen MS, Templeton TJ, Enomoto S, Abrahante JE, Zhu G, Lancto CA, Deng M, Liu C, Widmer G, Tzipori S et al. 2004 Complete genome sequence of the apicomplexan, Cryptosporidium parvum. Science 304, 441-445. (doi: 10.1126/science.1094786)

  3. Aeschlimann SH, Jönsson F, Postberg J, Stover Na, Petera RL, Lipps H-J, Nowacki M, Swart EC. 2014 The draft assembly of the radically organized Stylonychia lemnae macronuclear genome. Genome Biol. Evol. 6, 1707-1723. (doi: 10.1093/gbe/evu139)

  4. Akiyoshi DE, Morrison HG, Lei S, Feng X, Zhang Q, Corradi N, Mayanja H, Tumwine JK, Keeling PJ, Weiss LM et al. 2009 Genomic survey of the non-cultivatable opportunistic human pathogen, Enterocytozoon bieneusi. PLoS Pathog. 5, e1000261. (doi: 10.1371/journal.ppat.1000261)

  5. Al-Dous EK, George B, Al-Mahmoud ME, Al-Jaber MY, Wang H, Salameh YM, Al-Azwani EK, Chaluvadi S, Pontaroli AC, Debarry J et al. 2011 De novo genome sequencing and comparative genomics of date palm (Phoenix dactylifera). Nat. Biotech. 29, 521-527. (doi: 10.1038/nbt.1860)

  6. Alföldi J, Di Palma F, Grabherr M, Williams C, Kong L, Mauceli E, Russell P, Lowe CB, Glor RE, Jaffe JD et al. 2011 The genome of the green anole lizard and a comparative analysis with birds and mammals. Nature. 477, 587-591. (doi:10.1038/nature10390)

  7. Amborella Genome Project. 2013 The Amborella genome and the evolution of flowering plants. Science 342, 1241089. (doi: 10.1126/science.1241089)

  8. Amemiya CT, Alföldi J, Lee AP, Fan S, Philippe H, MacCallum I, Braasch I, Manousaki T, Schneider I, Rohner N et al. 2013 The African coelacanth genome provides insights into tetrapod evolution. Nature 496, 311-316. (doi:10.1038/nature12027)

  9. Amselem J, Cuomo CA, van Kan JAL, Viaud M, Benito EP, Couloux A, Coutinho PM, de Vries RP, Dyer PS, Fillinger S et al. 2011 Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea. PLoS Genet. 7, e1002230. (doi: 10.1371/journal.pgen.1002230)

  10. Andersen MR, Salazar MP, Schaap PJ, van de Vondervoort PJI, Culley D, Thykaer J, Frisvad JC, Nielsen KF, Albang R, Albermann K et al. 2011 Comparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88. Genome Res. 21, 885-897. (doi: 10.1101/gr.112169.110)

  11. Antonielli L, Strauss J, Sessitsch A, Berger H. 2014 Draft genome sequence of Phaeomoniella chlamydospora strain RR-HG1, a grapevine trunk disease (Esca)-related member of the Ascomycota. Genome Announce. 2, e00098-00014. (doi: 10.1128/genomeA.00098-14)

  12. Aparicio S, Chapman J, Stupka E, Putnam N, Chia J-M, Dehal P, Christoffels A, Rash S, Hoon S, Smit A et al. 2002 Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes. Science 297, 1301-1310. (doi: 10.1126/science.1072104)

  13. Ashman T-L, Bachtrog D, Blackmon H, Goldberg EE, Hahn MW, Kirkpatrick M, Kitano J, Mank JE, Mayrose I, Ming R et al. 2014 Tree of Sex: A database of sexual systems. Scientific Data. 1, 140015. (doi:10.1038/sdata.2014.15)

  14. Arai R. 2011 Fish Karyotypes: A Checklist. Tokyo, Springer,(doi:10.1007/978-4-431-53877-6)

  15. Aragona M, Minio A, Ferrarini A, Valente MT, Bagnaresi P, Orrù L, Tononi P, Zamperin G, Infantino A, Valè G et al. 2014 De novo genome assembly of the soil-borne fungus and tomato pathogen Pyrenochaeta lycopersici. BMC Genomics 15,313. (doi:10.1186/1471-2164-15-313)

  16. Argout X, Salse J, Aury J-M, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN et al. 2011 The genome of Theobroma cacao. Nat. Genet. 43, 101-108. (doi:10.1038/ng.736)

  17. Arensburger P, Megy K, Waterhouse RM, Abrudan J, Amedeo P, Antelo B, Bartholomay L, Bidwell S, Caler E, Camara F et al. 2010 Sequencing of Culex quinquefasciatus establishes a platform for mosquito comparative genomics. Science 330, 86-88. (doi: 10.1126/science.1191864)

  18. Armbrust EV, Berges JA, Bowler C, Green BR, Martinez D, Putnam NH, Zhou S, Allen AE, Apt KE, Bechner M et al. 2004 The genome of the diatom Thalassiosira pseudonana, ecology, evolution, and metabolism. Science 306, 79-86. (doi: 10.1126/science.1101156)

  19. Aury J-M, Jaillon O, Duret L, Noel B, Jubin C, Porcel BM, Ségurens B, Daubin V, Anthouard V, Aiach N et al. 2006 Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Nature 444, 171-178. (doi:10.1038/nature05230)

  20. Aylward FO, Burnum-Johnson KE, Tringe SG, Teiling C, Tremmel DM, Moeller JA, Scott JJ, Barry KW, Piehowski PD, Nicora CD et al. 2013 Leucoagaricus gongylophorus produces diverse enzymes for the degradation of recalcitrant plant polymers in leaf-cutter ant fungus gardens. Appl. Environ. Microb. 79, 3770-3778. (doi: 10.1128/AEM.03833-12)

  21. Bai X, Adams BJ, Ciche TA, Clifton S, Gaugler R, Kim K, Spieth J, Sternberg PW, Wilson RK, Grewal PS. 2013 A lover and a fighter: the genome sequence of an entomopathogenic nematode Heterorhabditis bacteriophora. PLoS One. 8, e69618. (doi: 10.1371/journal.pone.0069618)

  22. Banks JA, Nishiyama T, Hasebe M, Bowman JL, Gribskov M, DePamphilis C, Albert VA, Aono N, Aoyama T, Ambrose BA et al. 2011 The Selaginella genome identifies genetic changes associated with the evolution of vascular plants. Science 322, 960-963. (doi: 10.1126/science.1203810)

  23. Baroncelli R, Sanz-Martín JM, Rech GE, Sukno SA, Thon MR. 2014 Draft genome sequence of Colletotrichum sublineola, a destructive pathogen of cultivated sorghum. Genome Announce. 2, 10-11. (doi: 10.1128/genomeA.00540-14)

  24. Baroncelli R, Sreenivasaprasad S, Sukno SA, Thon MR, Holub E. 2014 Draft genome sequence of Colletotrichum acutatum Sensu Lato (Colletotrichum fioriniae). Genome Announce. 2, e00112-e00114. (doi:10.1128/genomeA.00112-14)

  25. Baxter L, Tripathy S, Ishaque N, Boot N, Cabral A, Kemen E, Thines M, Ah-Fong A, Anderson R, Badejoko W et al. 2010 Signatures of adaptation to obligate biotrophy in the Hyaloperonospora arabidopsidis genome. Science 330, 1549-1551. (doi: 10.1126/science.1195203)

  26. Belknap WR, Wang Y, Huo N, Wu J, Rockhold DR, Gu TQ, Stover E. 2011 Characterizing the citrus cultivar Carrizo genome through 454 shotgun sequencing. Genome 54, 1005-1015. (doi: 10.1139/g11-070)

  27. Bennett MD, Leitch IJ. 2011 Nuclear DNA amounts in angiosperms, targets, trends and tomorrow. Ann. Bot-London 107, 467-590. (doi: 10.1093/aob/mcq258)

  28. Bennetzen JL, Schmutz J, Wang H, Percifield R, Hawkins J, Pontaroli AC, Estep M, Feng L, Vaughn JN, Grimwood J et al. 2012 Reference genome sequence of the model plant Setaria. Nat. Biotech. 30, 555-561. (doi:10.1038/nbt.2196)

  29. Berka RM, Grigoriev IV, Otillar R, Salamov A, Grimwood J, Reid I, Ishmael N, John T, Darmond C, Moisan M-C et al. 2011 Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris. Nat. Biotech. 29, 922-927. (doi:10.1038/nbt.1976)

  30. Berriman M, Ghedin E, Hertz-Fowler C, Blandin G, Renauld H, Bartholomeu DC, Lennard NJ, Caler E, Hamlin NE, Haas B et al. 2005 The genome of the African trypanosome Trypanosoma brucei. Science 309, 416-422. (doi: 10.1126/science.1112642)

  31. Berriman M, Haas B, LoVerde PT, Wilson RA, Dillon GP, Cerqueira GC, Mashiyama ST, Al-Lazikani B, Andrade LF, Ashton PD et al. 2009 The genome of the blood fluke Schistosoma mansoni. Nature. 460, 352-360. (doi: 10.1038/nature08160)

  32. Bhattacharya D, Price DC, Xin Chan C, Qiu H, Rose N, Ball S, Weber APM, Arias MC, Henrissat B, Coutinho PM et al. 2013 Genome of the red alga Porphyridium purpureum. Nat. Comm. 4, 1941. (doi:10.1038/ncomms2931)

  33. Blanc G, Duncan G, Agarkova I, Borodovsky M, Gurnon J, Kuo A, Lindquist E, Lucas S, Pangilinan J, Polle J et al. 2010 The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex. Plant Cell. 22, 2943-2955. (doi: 10.1105/tpc.110.076406)

  34. Blanc G, Agarkova I, Grimwood J, Kuo A, Brueggeman A, Dunigan DD, Gurnon J, Ladunga I, Lindquist E, Lucas S et al. 2012 The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation. Genome Biol. 13, R39. (doi: 10.1186/gb-2012-13-5-r39)

  35. Blanco-Ulate B, Rolshausen PE, Cantu D. 2013 Draft genome sequence of the grapevine dieback fungus Eutypa lata UCR-EL1.Genome Announce. 1, 3-4. (doi: 10.1128/genomeA.00228-13)

  36. Bolger A, Scossa F, Bolger ME, Lanz C, Maumus F, Tohge T, Quesneville H, Alseekh S, Sørensen I, Lichtenstein G et al. 2014 The genome of the stress-tolerant wild tomato species Solanum pennellii. Nat. Genet. 46, 1034-1038. (doi:10.1038/ng.3046)

  37. Bonasio R, Zhang G, Ye C, Mutti NS, Fang X, Qin N, Donahue G, Yang P, Li Q, Li C et al. 2010 Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator. Science 329, 1068-1071. (doi: 10.1126/science.1192428)

  38. Bowler C, Allen AE, Badger JH, Grimwood J, Jabbari K, Kuo A, Maheswari U, Martens C, Maumus F, Otillar RP et al. 2008 The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature 456, 239-244. (doi:10.1038/nature07410)

  39. Brayton KA, Lau AOT, Herndon DR, Hannick L, Kappmeyer LS, Berens SJ, Bidwell SL, Brown WC, Crabtree J, Fadrosh D et al. 2007 Genome sequence of Babesia bovis and comparative analysis of apicomplexan hemoprotozoa. PLoS Pathog. 3, 1401-1413. (doi: 10.1371/journal.ppat.0030148)

  40. Brenchley R, Spannagl M, Pfeifer M, Barker GLa, D'Amore R, Allen AM, McKenzie N, Kramer M, Kerhornou A, Bolser D et al. 2012 Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature 491, 705-710. (doi:10.1038/nature11650)

  41. Brugère JF, Cornillot E, Méténier G, Bensimon A, Vivarès CP. 2000 Encephalitozoon cuniculi (Microspora) genome, physical map and evidence for telomere-associated rDNA units on all chromosomes. Nucleic Acids Res. 28, 2026-2033.

  42. Burmester A, Shelest E, Glöckner G, Heddergott C, Schindler S, Staib P, Heidel A, Felder M, Petzold A, Szafranski K et al. 2011 Comparative and functional genomics provide insights into the pathogenicity of dermatophytic fungi. Genome Biol. 12, R7. (doi: 10.1186/gb-2011-12-1-r7)

  43. Bushley KE, Raja R, Jaiswal P, Cumbie JS, Nonogaki M, Boyd AE, Owensby CA, Knaus BJ, Elser J, Miller D et al. 2013 The genome of Tolypocladium inflatum, evolution, organization, and expression of the cyclosporin biosynthetic gene cluster. PLoS Genet. 9, e1003496. (doi:  10.1371/journal.pgen.1003496)

  44. Butler G, Rasmussen MD, Lin MF, Santos MAS, Sakthikumar S, Munro CA, Rheinbay E, Grabherr M, Reedy JL, Agrafioti I et al. 2010 Evolution of pathogenicity and sexual reproduction in eight Candida genomes. Nature 459, 657-662. (doi:10.1038/nature08064)

  45. Campbell SE, Williams TA, Yousuf A, Soanes DM, Paszkiewicz KH, Williams BAP. 2013 The genome of Spraguea lophii and the basis of host-microsporidian interactions. PLoS Genet. 9, e1003676. (doi: 10.1371/journal.pgen.1003676)

  46. Cantu D, Govindarajulu M, Kozik A, Wang M, Chen X, Kojima KK, Jurka J, Michelmore RW, Dubcovsky J. 2011 Next generation sequencing provides rapid access to the genome of Puccinia striiformis f. sp. tritici, the causal agent of wheat stripe rust. PLoS One. 6, e24230. (doi: 10.1371/journal.pone.0024230)

  47. Cao Z, Yu Y, Wu Y, Hao P, Di Z, He Y, Chen Z, Yang W, Shen Z, He X et al. 2013 The genome of Mesobuthus martensii reveals a unique adaptation model of arthropods. Nat. Comm. 4, 2602. (doi:10.1038/ncomms3602)

  48. Carlton JM, Adams JH, Silva JC, Bidwell SL, Lorenzi H, Caler E, Crabtree J, Angiuoli SV, Merino EF, Amedeo P et al. 2008 Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Nature 455, 757-763. (doi:10.1038/nature07327)

  49. Carlton JM, Angiuoli SV, Suh BB, Kooij TW, Pertea M, Silva JC, Ermolaeva MD, Allen JE, Selengut JD, Koo HL et al. 2002 Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii. Nature. 419, 512-519. (doi:10.1038/nature01099)

  50. Carlton JM, Hirt RP, Silva JC, Delcher AL, Schatz M, Zhao Q, Wortman JR, Bidwell SL, Alsmark UCM, Besteiro S et al. 2007 Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Science 315, 207-212. (doi: 10.1126/science.1132894)

  51. Castoe TA, De Koning APJ, Hall KT, Card DC, Schield DR, Fujita MK, Ruggiero RP, Degner JF, Daza JM, Gu W et al. 2013 The Burmese python genome reveals the molecular basis for extreme adaptation in snakes. Proc. Natl. Acad. Sci. USA. 110, 20645-20650. (doi: 10.1073/pnas.1314475110)

  52. Castoe TA, de Koning AJ, Hall KT, Yokoyama KD, Gu W, Smith EN, Feschotte C, Uetz P, Ray DA, Dobry J et al. 2011 Sequencing the genome of the Burmese python (Python molurus bivittatus) as a model for studying extreme adaptations in snakes. Genome Biol. 12, 406. (doi:10.1186/gb-2011-12-7-406)

  53. Cerqueira GC, Arnaud MB, Inglis DO, Skrzypek MS, Binkley G, Simison M, Miyasato SR, Binkley J, Orvis J, Shah P et al. 2014 The Aspergillus Genome Database: Multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations. Nucleic Acids Res. 42(D1), 705-710. (doi: 10.1093/nar/gkt1029)

  54. Chagné D, Crowhurst RN, Pindo M, Thrimawithana A, Deng C, Ireland H, Fiers M, Dzierzon H, Cestaro A, Fontana P et al. 2014 The draft genome sequence of European pear (Pyrus communis L. 'Bartlett'). PLoS One. 9, e92644. (doi: 10.1371/journal.pone.0092644)

  55. Chan AP, Crabtree J, Zhao Q, Lorenzi H, Orvis J, Puiu D, Melake-Berhan A, Jones KM, Redman J, Chen G et al. 2010 Draft genome sequence of the oilseed species Ricinus communis. Nat. Biotech. 28, 951-956. (doi:10.1038/nbt.1674)

  56. Chan GF, Bamadhaj HM, Gan HM, Rashid NAA. 2012 Genome sequence of Aureobasidium pullulans AY4, an emerging opportunistic fungal pathogen with diverse biotechnological potential. Eukaryot. Cell 11, 1419-1420. (doi: 10.1128/EC.00245-12)

  57. Chan CL, Yew SM, Na SL, Tan Y-c, Lee KW, Yee W-y, Ngeow YF, Ng PK. 2014 Draft genome sequence of Ochroconis constricta UM 578 , isolated from human skin scraping. Genome Announce. 2, e000740-000714. (doi: 10.1128/genomeA.00074-14)

  58. Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, Weinmaier T, Rattei T, Balasubramanian PG, Borman J, Busam D et al. 2010 The dynamic Hydra genome. Nature. 464, 592-596. (doi: 10.1038/nature08830)

  59. Chen J, Huang Q, Gao D, Wang J, Lang Y, Liu T, Li B, Bai Z, Luis Goicoechea J, Liang C et al. 2013 Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution. Nat. Comm. 4, 1595. (doi:10.1038/ncomms2596)

  60. Chen S, Xu J, Liu C, Zhu Y, Nelson DR, Zhou S, Li C, Wang L, Guo X, Sun Y et al. 2012 Genome sequence of the model medicinal mushroom Ganoderma lucidum. Nat. Comm. 3, 913. (doi: 10.1038/ncomms1923)

  61. Chen S, Zhang G, Shao C, Huang Q, Liu G, Zhang P, Song W, An N, Chalopin D, Volff J-N et al. 2014 Whole-genome sequence of a flatfish provides insights into ZW sex chromosome evolution and adaptation to a benthic lifestyle. Nat. Genet. 46, 253-260. (doi:10.1038/ng.2890)

  62. Chiu JC, Jiang X, Zhao L, Hamm CA, Cridland JM, Saelao P, Hamby KA, Lee EK, Kwok RS, Zhang G et al. 2013 Genome of Drosophila suzukii, the spotted wing Drosophila. G3 3, 2257-2271. (doi: 10.1534/g3.113.008185)

  63. Cho YS, Hu L, Hou H, Lee H, Xu J, Kwon S, Oh S, Kim H-M, Jho S, Kim S et al. 2013 The tiger genome and comparative analysis with lion and snow leopard genomes. Nat. Comm. 4, 2433. (doi:10.1038/ncomms3433)

  64. Chu WS, Magee BB, Magee PT. 1993 Construction of an SfiI macrorestriction map of the Candida albicans genome. J. Bacteriol. 175, 6637-6651.

  65. Cissé OH, Almeida JMGCF, Fonseca Á, Kumar A, Salojärvi J, Overmyer K. 2013 Genome sequencing of the plant pathogen Taphrina deformans, the causal agent of peach leaf curl. mBio 4, e00055-00013. (doi: 10.1128/mBio.00055-13)

  66. Cissé OH, Pagni M, Hauser PM. 2013 Specimen from a patient de novo assembly of the Pneumocystis jirovecii genome from a single bronchoalveolar lavage fluid specimen from a patient. mBio 4, e00428-00412. (doi: 10.1128/mBio.00428-12)

  67. Clarke M, Lohan AJ, Liu B, Lagkouvardos I, Roy S, Zafar N, Bertelli C, Schilde C, Kianianmomeni A, Burglin TR et al. 2013 Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling. Genome Biol. 14, R11. (doi:10.1186/gb-2013-14-2-r11)

  68. Cock JM, Sterck L, Rouzé P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury J-M, Badger JH et al. 2010 The Ectocarpus genome and the independent evolution of multicellularity in brown algae. Nature 465, 617-621. (doi:10.1038/nature09016)

  69. Colbourne JK, Pfrender ME, Gilbert D, Thomas WK, Tucker A, Oakley TH, Tokishita S, Aerts A, Arnold GJ, Basu MK et al. 2011 The ecoresponsive genome of Daphnia pulex. Science 331, 555-561. (doi: 10.1126/science.1197761)

  70. Coleman JJ, Rounsley SD, Rodriguez-Carres M, Kuo A, Wasmann CC, Grimwood J, Schmutz J, Taga M, White GJ, Zhou S et al. 2009 The genome of Nectria haematococca, contribution of supernumerary chromosomes to gene expansion. PLoS Genet. 5, e1000618. (doi: 10.1371/journal.pgen.1000618)

  71. Collen J, Porcel B, Carre W, Ball SG, Chaparro C, Tonon T, Barbeyron T, Michel G, Noel B, Valentin K et al. 2013 Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida. Proc. Natl. Acad. Sci. USA. 110, 5247-5252. (doi: 10.1073/pnas.1221259110)

  72. Collins C, Keane TM, Turner DJ, O'Keeffe G, Fitzpatrick Da, Doyle S. 2013 Genomic and proteomic dissection of the ubiquitous plant pathogen, Armillaria mellea, toward a new infection model system. J. Proteome Res. 12, 2552-2570. (doi: 10.1021/pr301131t)

  73. Condon BJ, Leng Y, Wu D, Bushley KE, Ohm RA, Otillar R, Martin J, Schackwitz W, Grimwood J, MohdZainudin N et al. 2013 Comparative genome structure, secondary metabolite, and effector coding capacity across Cochliobolus pathogens. PLoS Genet. 9, e1003233. (doi: 10.1371/journal.pgen.1003233)

  74. Cornillot E, Hadj-Kaddour K, Dassouli A, Noel B, Ranwez V, Vacherie B, Augagneur Y, Brès V, Duclos A, Randazzo S et al. 2012 Sequencing of the smallest Apicomplexan genome from the human pathogen Babesia microti. Nucleic Acids Res. 40, 9102-9114. (doi: 10.1093/nar/gks700)

  75. Cornman RS, Chen YP, Schatz MC, Street C, Zhao Y, Desany B, Egholm M, Hutchison S, Pettis JS, Lipkin WI et al. 2009 Genomic analyses of the microsporidian Nosema ceranae, an emergent pathogen of honey bees. PLoS Pathog. 5, e1000466. (doi: 10.1371/journal.ppat.1000466)

  76. Corradi N, Haag KL, Pombert J-F, Ebert D, Keeling PJ. 2009 Draft genome sequence of the Daphnia pathogen Octosporea bayeri, insights into the gene content of a large microsporidian genome and a model for host-parasite interactions. Genome Biol. 10, R106. (doi:10.1186/gb-2009-10-10-r106)

  77. Corradi N, Pombert J-F, Farinelli L, Didier ES, Keeling PJ. 2010 The complete sequence of the smallest known nuclear genome from the microsporidian Encephalitozoon intestinalis. Nat. Comm. 1,77. (doi: 10.1038/ncomms1082)

  78. Cotton JA, Lilley CJ, Jones LM, Kikuchi T, Reid AJ, Thorpe P, Tsai IJ, Beasley H, Blok V, Cock PJ et al. 2014 The genome and life-stage specific transcriptomes of Globodera pallida elucidate key aspects of plant parasitism by a cyst nematode. Genome Biol. 15, R43. (doi:10.1186/gb-2014-15-3-r43)

  79. Coyne RS, Hannick L, Shanmugam D, Hostetler JB, Brami D, Joardar VS, Johnson J, Radune D, Singh I, Badger JH et al. 2011 Comparative genomics of the pathogenic ciliate Ichthyophthirius multifiliis, its free-living relatives and a host species provide insights into adoption of a parasitic lifestyle and prospects for disease control. Genome Biol. 12, R100. (doi:10.1186/gb-2011-12-10-r100)

  80. Crameri G, Todd S, Grimley S, McEachern JA, Marsh GA, Smith C, Tachedjian M, de Jong C, Virtue ER, Yu M et al. 2009 Establishment, immortalisation and characterisation of pteropid bat cell lines. PLoS One 4, e8266. (doi: 10.1371/journal.pone.0008266)

  81. Cuomo CA, Güldener U, Xu J-R, Trail F, Turgeon BG, Di Pietro A, Walton JD, Ma L-J, Baker SE, Rep M et al. 2007 The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization. Science

    Download 0.51 Mb.

    Share with your friends:
  1   2   3   4   5   6




The database is protected by copyright ©ininet.org 2022
send message

    Main page