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BCH 411 BIOINFORMATICS; (2 Units)



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BIOCHEMISTRY CURRICULUM
Lecture note on Statistics for Physical, Lecture note on Statistics for Physical, OB

BCH 411 BIOINFORMATICS; (2 Units)
Information to bioinformatics. Introduction to linux. Gene finding/sequencing, database and introduction to emboss. Sequence alignment, emboss water and needle. Blastand sequence alignment, blast 101. Sequence signature and motifs/sequence. Singnature databases interpro. Protein function prediction and protein interaction/string etc. phylogenetics/phylogenetics MSA,
MAFFT lab. Variation and molecular level, natural/HIO, KA/KS. Structural bioinformatics,

chimera, P
Y
MOI, NCBI’s Entrez, BLAST, PSI-BLAST, clustal W, Pfam, PRINTS, BLOCKS,
Prosite and PDB.

BCH 412 ADVANCED BIOCHEMICAL METHODS (2 Units)
Principles of instrumentation. Principles, methodologies and applications of electrophoresis. Chromatography – paper chromatography, thin layer chromatography, column chromatography, ion exchange, gel filtration. Spectroscopy and spectrophotometry (Infrared, visble and ultraviolet absorption, fluorescence, phosphorescence. Centrifugation and isotopic techniques. Optical methods.
BCH 414 FUNDAMENTALS OF BIOSIGNALLING AND ONCOLOGY (2 Units). Structure and function of signal pathways signaling of nuclear receptors. G-protein coupled signal transmission pathway, Intracellular messengers/second messengers, serine/threonine specific protein kinases, tyrosine-specific protein phosphatases, ras protein-protein kinase, MAP kinases, membrane receptors with associated tyrosine kinase activity (JANUS kinase, other receptor classes. Regulation of cell cycle. Malfunction of signaling pathways and tumorigenesis. Oncogenes and tumor suppressor genes. Apoptosis.
BCH 499 RESEARCH PROJECTS (6 Units)
Independent research findings into selected areas/topics of interest to the academic staff. Students will be required to carryout literature survey on the topics, perform experiments and produce reports (preferably at the end of second semester. Students will be subjected to both seminar and oral examination on the projects undertaken.

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