Patrick m. Gaffney educational background
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| PATRICK M. GAFFNEY
EDUCATIONAL BACKGROUND Ph.D. Biological Sciences, SUNY Stony Brook, 1986 Fulbright Scholar, University of Cambridge, 1973-74 A.B. Zoology, University of California, Berkeley, 1973
Associate Director, Marine Biosciences Program, 2002-2013 Associate Professor, University of Delaware College of Marine Studies, 1993-2002 Assistant Professor, University of Delaware College of Marine Studies, 1987-1993 Sea Grant Postdoctoral Research Associate, Department of Ecology and Evolution, SUNY Stony Brook, 1986-1987 Research Assistant, Department of Ecology and Evolution, SUNY Stony Brook, 1982 Environmental Consultant, Jones & Stokes Associates, Inc., Sacramento, California, 1976-1978 Adjunct Professor, Centro de Investigaciones Biológicas de Noroeste (Baja California Sur, Mexico), 05/1996-present
Huo Z, Wang Z, Yan X, Gaffney PM (2013) Fertilization, survival, and growth of Crassostrea hongkongensis ♀ × Crassostrea ariakensis ♂ hybrids in Northern China. Journal of Shellfish Research 32, 377-385. Zhang GF et al. (85 authors) (2012) The oyster genome reveals stress adaptation and complexity of shell formation. Nature 490, 49-54. Kim W-J, Jung H, Gaffney PM (2011) Development of Type I genetic markers from expressed sequence tags in highly polymorphic species. Marine Biotechnology 13, 127-132. Milbury CA, Lee JC, Cannone JJ, Gaffney PM, Gutell RR (2010) Fragmentation of the large subunit ribosomal RNA gene in oyster mitochondrial genomes. BMC Genomics 11, 485
Kim W-J, Jung H, Gaffney PM (2010) Development of Type I genetic markers from expressed sequence tags in highly polymorphic species. Mar Biotech 10.1007/s10126-010-9280-4 Costa de Melo AG, Varela ES, Beasley CR, Schneider H, Sampaio I, Gaffney PM, Reece KS, Tagliaro CH (2010) Molecular identification, phylogeny and geographic distribution of Brazilian mangrove oysters (Crassostrea). Genetics and Molecular Biology 33, 564-572 Varney R, Galindo-Sánchez CE, Cruz P, Gaffney PM (2009) Population genetics of the eastern oyster Crassostrea virginica (Gmelin, 1791) in the Gulf of Mexico. Journal of Shellfish Research 28, 855-864. Kuhn KL, Gaffney PM (2008) Population subdivision in the Antarctic toothfish (Dissostichus mawsoni) revealed by mitochondrial and nuclear single nucleotide polymorphisms (SNPs). Antarctic Science, 20, 327-338. Galindo-Sánchez CE, Gaffney PM, Pérez-Rostro CI, et al. (2008) Assessment of genetic diversity of the eastern oyster Crassostrea virginica in Veracruz, Mexico using microsatellite markers. Journal of Shellfish Research, 27, 721-727 Ulrich PN, Colton CM, Hoover CA, Gaffney PM, Marsh AG (2007) Haplosporidium nelsoni (MSX) rDNA detected in oysters from the Gulf of Mexico and the Caribbean Sea. J Shellfish Res 26:195-199
Kuhn KL, Gaffney PM (2006) Preliminary assessment of population structure in the mackerel icefish (Champsocephalus gunnari). Polar Biology 29:927-935 Valles-Jimenez R, Gaffney PM, Perez-Enriquez R (2006) RFLP analysis of the mtDNA control region in white shrimp (Litopenaeus vannamei) populations from the eastern Pacific. Marine Biology 148:867-873
Elfstrom CM, Gaffney PM, Smith CT, Seeb JE (2005) Characterization of 12 single nucleotide polymorphisms in weathervane scallop. Molecular Ecology Notes 5:406-409 Hedgecock D, Gaffney PM, Goulletquer P, Guo X, Reece K, Warr GW (2005) The case for sequencing the Pacific oyster genome. Journal of Shellfish Research 24:429-441 Hoover CA, Gaffney PM (2005) Geographic variation in nuclear genes of the eastern oyster, Crassostrea virginica Gmelin. Journal of Shellfish Research 24:103-112 Milbury CA, Gaffney PM (2005) Complete mitochondrial DNA sequence of the eastern oyster Crassostrea virginica. Marine Biotechnology 7:697-712 Smith PJ, Gaffney PM (2005) Low genetic diversity in the Antarctic toothfish Dissostichus mawsoni observed with mitochondrial and intron DNA markers. CCAMLR Science 12:43-51 Milbury CA, Gaffney PM, Meritt DW, Newell RIE (2004) Mitochondrial DNA markers allow monitoring of oyster stock enhancement in the Chesapeake Bay. Marine Biology 145:351-359 Bayha KM, Harbison GR, McDonald JH, Gaffney PM (2004) Preliminary investigation on the molecular systematics of the invasive ctenophore Beroe ovata. In: Dumont HJ, Shiganova TA, Niermann U (eds) Aquatic Invasions in the Black, Caspian, and Mediterranean Seas. Kluwer Academic Publishers, Dordrecht, p 167-175 Cruz P, Ibarra AM, Mejia-Ruiz H, Gaffney PM, Pérez-Enríquez R (2004) Genetic variability assessed by microsatellites in a breeding program of Pacific white shrimp (Litopenaeus vannamei). Marine Biotechnology 6:157-164 Reece KS, Ribeiro WL, Gaffney PM, Carnegie RB, Allen SK, Jr. (2004) Microsatellite marker development and analysis in the eastern oyster (Crassostrea virginica): confirmation of null alleles and non-Mendelian segregation ratios. Journal of Heredity 95:346-352 Gaffney PM (2003) Genomic approaches to marker development and mapping in the eastern oyster, Crassostrea virginica. In: Shimizu N, Aoki T, Hirono I, Takashima F (eds) Aquatic Genomics Steps Towards a Great Future. Springer-Verlag, Tokyo, p 84-91 Gaffney PM, Pierce JC, Mackinlay AG, Titchen DA, Glenn WK (2003) Pearl, a novel family of putative transposable elements in bivalve mollusks. Journal of Molecular Evolution 56:308-316 Smith PJ, Gaffney PM, Roberts CD (2003) Phylogenetic relationships of the silver trumpeter Latris pacifica (Teleostei, Percomorpha, Latridae) based on allozymes and mitochondrial cytochrome b sequences. Journal of the Royal Society of New Zealand 33:755-767 Smith PJ, McMillan PJ, Bull B, McVeagh SM, Gaffney PM, Chow S (2002) Genetic and meristic variation in black and smooth oreos in the New Zealand Exclusive Economic Zone. New Zealand Journal of Marine and Freshwater Research 36:737-750 Xu Z, Guo X, Gaffney PM, Pierce JC (2001) Chromosomal location of the major ribosomal RNA genes in Crassostrea virginica and Crassostrea gigas. Veliger 44:79-83 Smith PJ, Gaffney PM, Purves M (2001) Genetic markers for identification of Patagonian toothfish and Antarctic toothfish. Journal of Fish Biology 58:1190-1194 Brown BL, Franklin DE, Gaffney PM, Hong M, DenDanto D, Kornfield I (2000) Characterization of microsatellite loci in the eastern oyster, Crassostrea virginica. Molecular Ecology 9:2217-2219 Gaffney PM (2000) Molecular tools for understanding population structure in Antarctic species. Antarctic Science 12:288-296 Oliver JL, Gaffney PM, S K Allen J, Faisal M, Kaattari SL (2000) Protease inhibitory activity in selectively bred families of eastern oysters. Journal of Aquatic Animal Health 12:136-145 Orbacz EA, Gaffney PM (2000) Genetic structure of tautog (Tautoga onitis) populations assayed by RFLP and DGGE analysis of mitochondrial and nuclear genes. Fishery Bulletin 98:336-344 Pierce JC, Tan G, Gaffney PM (2000) Delaware Bay and Chesapeake Bay populations of the horseshoe crab Limulus polyphemus are genetically distinct. Estuaries 23:690-698 Smith P, Gaffney P (2000) Toothfish stock structure revealed with DNA methods. Water & Atmosphere 8:17-18 Lankford TE, Jr., Targett TE, Gaffney PM (1999) Mitochondrial DNA analysis of population structure in the Atlantic croaker, Micropogonias undulatus (Perciformes: Sciaenidae). Fishery Bulletin 97:884-890 Ó Foighil D, Gaffney PM, Wilbur AE, Hilbish TJ (1998) Mitochondrial cytochrome oxidase I gene sequences support an Asian origin for the Portuguese oyster Crassostrea angulata. Marine Biology 131:497-503 Alcivar-Warren A, Dunham R, Gaffney P, Kocher T, Thorgaard G (1997) First aquaculture species genome mapping workshop. Animal Genetics 28:451-452 Wilbur AE, Gaffney PM (1997) A genetic basis for geographic variation in shell morphology in the bay scallop, Argopecten irradians. Marine Biology 128:97-105 Wilbur AE, Orbacz EA, Wakefield JR, Gaffney PM (1997) Mitochondrial genotype variation in a Siberian population of the Japanese scallop, Patinopecten yessoensis (Jay). Journal of Shellfish Research 16:541-545 Carriker MR, Gaffney PM (1996) A catalogue of selected species of living oysters (Ostreacea) of the world. In: Kennedy VS, Newell RIE, Eble AF (eds) The Eastern Oyster Crassostrea virginica. Maryland Sea Grant College, College Park, p 1-18
Ó Foighil D, Gaffney PM, Hilbish TJ (1995) Differences in mitochondrial 16S ribosomal gene sequences allow discrimination among American [Crassostrea virginica (Gmelin)] and Asian [C. gigas (Thunberg) C. ariakensis Wakiya] oyster species. Journal of Experimental Marine Biology and Ecology 192:211-220 Gaffney PM (1994) Heterosis and heterozygote deficiencies in marine bivalves: more light? In: Beaumont AR (ed) Genetics and Evolution of Aquatic Organisms. Gaffney PM, Allen SK, Jr. (1993) Hybridization among Crassostrea species: a review. Aquaculture 116:1-13 Gaffney PM, Bernat CM, Allen SK, Jr. (1993) Gametic incompatibility in wild and cultured populations of the eastern oyster, Crassostrea virginica Gmelin. Aquaculture 115:273-284 Guo X, Gaffney PM (1993) Artifical gynogenesis in the Pacific oyster, Crassostrea gigas: II. Allozyme inheritance and early growth. Journal of Heredity 84:311-315 Allen SK, Jr., Gaffney PM (1993) Genetic confirmation of hybridization between Crassostrea gigas (Thunberg) and Crassostrea rivularis (Gould). Aquaculture 113:291-300 Allen SK, Jr., Gaffney PM, Scarpa J, Bushek D (1993) Inviable hybrids of Crassostrea virginica (Gmelin) with C. rivularis (Gould) and C. gigas (Thunberg). Aquaculture 113:269-289 Gaffney PM, Davis CV, Hawes RO (1992) Assessment of drift and selection in hatchery populations of oysters (Crassostrea virginica). Aquaculture 105:1-20 Gaffney PM, Allen SK, Jr. (1992) Genetic aspects of introduction and transfer of molluscs. Journal of Shellfish Research 11:535-538 Gaffney PM, McGee B (1992) Multiple paternity in Crepidula fornicata (Linnaeus). Veliger 35:12-15 Ludwig AN, Gaffney PM (1991) Quantitative genetics of growth in the dwarf surfclam Mulinia lateralis (Say, 1822). Journal of Shellfish Research 10:451-453 Gaffney PM (1990) Enzyme heterozygosity, growth rate, and viability in Mytilus edulis: another look. Evolution 44:204-210 Gaffney PM, Scott TM, Koehn RK, Diehl WJ (1990) Interrelationships of heterozygosity, growth rate and heterozygote deficiencies in the coot clam, Mulinia lateralis. Genetics 124:687-699 Gaffney PM, Diehl WJ (1986) Growth, condition and specific dynamic action in the mussel Mytilus edulis recovering from starvation. Marine Biology 93:401-409 Diehl WJ, Gaffney PM, Koehn RK (1986) Physiological and genetic aspects of growth in the mussel Mytilus edulis. I. Oxygen consumption, growth and weight loss. Physiological Zoology 59:201-211 Diehl WJ, Gaffney PM, McDonald JH, Koehn RK (1985) Relationship between weight-standardized oxygen consumption and multiple-locus heterozygosity in the mussel, Mytilus edulis. In: Gibbs PE (ed) Proceedings of the 19th European Marine Biology Symposium. Cambridge University Press, Cambridge, p 529-534
Koehn RK, Gaffney PM (1984) Genetic heterozygosity and growth rate in Mytilus edulis. Marine Biology 82:1-7 Rodhouse PG, Gaffney PM (1984) Effect of heterozygosity on metabolism during starvation in the American oyster Crassostrea virginica. Marine Biology 80:179-187
Eanes WF, Gaffney PM, Koehn RK, Simon CM (1977) A study of sexual selection in natural populations of the milkweed beetle, Tetraopes tetraophthalmus. In: Christiansen FB, Fenchel TM (eds) Measuring Selection in Natural Populations. Springer-Verlag, Berlin, p 49-64 Gaffney PM (1975) Roots of the niche concept. American Naturalist 106:490 Gaffney PM (1973) Setal variation in Halosydna brevisetosa, a polynoid polychaete. Systematic Zoology 22:171-175 TECHNICAL REPORTS Gaffney PM, Ó Foighil D, Curole, J (2007) Peer Review Group Oyster EIS Report on Oyster Genetics, Maryland Environmental Service Smith P, Gaffney P (2000) Population genetics of Patagonian toothfish (Dissostichus eleginoides) and fillet identification of Patagonian toothfish and Antarctic toothfish (D. mawsoni). CCAMLR, Hobart, Australia Gaffney PM, Orbacz EA, Yu Z (1998) Using the DCode system to identify DNA sequence variation for studies of population structure in marine organisms. Bio-Rad Technical Note 2329 Allen SK, Jr., Gaffney PM, Ewart JE (1993) Genetic improvement of the eastern oyster for growth and disease resistance in the Northeast SELECTED KEYNOTE/INVITED PRESENTATIONS “Oyster genomics: pearl diving for dummies”, Victoria University of Wellington, Wellington, New Zealand (2011) “BAC haplotypes show extensive sequence polymorphism in the Pacific oyster genome”, 5th International Conference on Genomics, Shenzhen, China (2010) “Genetic Monitoring of Oyster Stock Enhancement”, South China Sea Institute of Oceanology, Guangzhou, China (2010) “Genetic Monitoring of Molluscan Stock Enhancement”, Science Consortium for Ocean Replenishment: Workshop on Assessment and Management of Genetic Diversity in Marine Stock Enhancement Programs, San Diego (2010) “Type I markers for linkage mapping and population genetics in Crassostrea”, International Symposium on Genetics in Aquaculture, Montpellier, France (2006) “Better Shellfish Restoration through Genetics?”, Eighth International Conference on Shellfish Restoration, Brest, France (2005) Testimony before the U.S. House of Representatives Committee on Resources hearing on the eastern oyster, Washington, D.C. (2005) “SNPs in oysters for population studies and genetic mapping“, Second International Symposium on Aquatic Genomics, Tokyo, Japan (2003) “Molecular monitoring of oyster stock enhancement efforts in Chesapeake Bay using high-throughput mitochondrial SNP genotyping”, The Interface Between Aquaculture and Stock Enhancement: Assessing the Promise of Replenishing Marine Fisheries, Center of Marine Biotechnology, Baltimore, MD (2002) “Progress with the selective breeding program for C. virginica”, National Academy of Sciences Workshop on Non-native Oysters in the Chesapeake Bay, Fredericksburg, VA (2002) “Selective breeding for disease resistance in Crassostrea virginica”, National Academy Workshop on Non-native Oysters in Chesapeake Bay, Fredericksburg, VA (2002) “Molecular Tools for Analyzing Marine Biodiversity and Abundance”, Scientific Committee on Oceanic Research Working Group 118, Census of Marine Life Initiative, Lima, Peru (2002) “Genetic Impacts of Shellfish Aquaculture and Transport”, Exploring On-bottom Shellfish Aquaculture for Alaska, Anchorage, AK (2001) “Genomic approaches to marker development and mapping in the eastern oyster, Crassostrea virginica”, International Symposium on Genetics in Aquaculture, Tokyo, Japan (2000) “Molecular Tools for Understanding Population Structure in Antarctic Species”, ICSU Subcommittee on Antarctic Research Workshop on Evolutionary Biology of Antarctic Organisms, Curitiba, Brazil (1999) “Oceans in the 21st Century: Molecular Technology and Biodiversity”, NHK Television special program, Tokyo, Japan (1997) EDITORIAL WORK/CONSULTANCIES/REVIEW PANELS Editorial board, Estuaries (1992-1995) Marine Biotechnology (2004-present) review panels for NSF, NMFS, Sea Grant, USDA, international agencies proposals reviewed for 26 agencies manuscripts reviewed for 37 journals DNA forensics for commercial fish and invasive molluscs (2001-present)
University of California President's Undergraduate Fellowship Outstanding Undergraduate, Dept. of Zoology, UC Berkeley Fulbright-Hays Fellowship (Cambridge University, UK) Visiting scientist, National Institute of Water and Atmospheric Research (Wellington, New Zealand) CSIRO Frohlich Fellow (Hobart, Australia) Visiting scientist, Observatoire Océanologique de Banyuls sur Mer, France Fulbright Senior Specialist (Victoria University of Wellington, New Zealand) PROFESSIONAL AFFILIATIONS/ MEMBERSHIPS Genetics Society of America National Shellfisheries Association Phi Beta Kappa Sigma Xi SELECTED PROFESSIONAL / COMMUNITY SERVICE Coordinator, Oyster Subcommittee, Aquaculture Species Genome Mapping Project (USDA NRSP-8), 1997-present Steering Committee, Oyster Genome Consortium (2005 – present) Board of Directors, USDA Northeastern Regional Aquaculture Center, 1995-present Workgroup facilitator, Oyster Research and Restoration in U.S. Coastal Waters-Strategies for the Future (Annapolis, MD) Invited panelist, Crassostrea ariakensis Workshop-EPA Chesapeake Bay Program (Annapolis, MD) Invited presentation on eastern oyster genetics to NOAA Status Review team (Silver Spring, MD) ICSU Subcommittee on Antarctic Research Workshop on Evolution in the Antarctic (EVOLANTA), Kent, UK (2000) Co-organizer, US-France Cooperative Program in Oceanography Joint Aquaculture Genetics Workshop, La Tremblade, France (2002) Participant, Scientific Committee on Oceanic Research Working Group 118, Census of Marine Life Initiative, Peru (2002) Executive Committee, USDA Molluscan Broodstock Program, (1996-1998) Organizer, Aquaculture Species Genome Workshop, Plant and Animal Genome Conference, San Diego, CA (2001) External Ph.D. examiner (Australia, Canada, South Africa) Session moderator for National Shellfisheries Association, Genetics & Evolution of Aquatic Organisms Symposium, Plant & Animal Genome Aquaculture Workshop, Society for the Study of Evolution Teaching and service on graduate student committees, Centro de Investigaciones Biológicas de Noroeste (Baja California Sur, Mexico), 1996-present Directory: File%20Library -> Our%20People -> Profiles File%20Library -> Aad ad Hoc Task Force on Doctors of Osteopathic Medicine File%20Library -> Credit Cards Cater to Consumers Wants, Needs, Desires File%20Library -> On a Grander Scale: The Outstanding Life of Sir Christopher File%20Library -> The Georgia Public Library Service and Georgia’s Public Libraries: a timeline of Important Events in Georgia Public Library History File%20Library -> Transportation/Directions From The Airport To The Hotel Profiles -> Kathryn J. Coyne University of Delaware Phone (office): (302) 645-4236 Download 35.82 Kb. Share with your friends:
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