Publication list on hydroshear use (to 11 January 2017) 2017


The Hypomethylated Partial Restriction (HMPR) method reduces the repetitive content of genomic libraries in Norway spruce (Picea abies)



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The Hypomethylated Partial Restriction (HMPR) method reduces the repetitive content of genomic libraries in Norway spruce (Picea abies).

Hanna Larsson, Emanuele De Paoli, Michele Morgante, Martin Lascoux, Niclas Gyllenstrand


Tree Genetics & Genomes, April 2013; 9(2): 601-612
Genome Analysis Suggests that the Soil Oligotrophic Bacterium Agromonas oligotrophica (Bradyrhizobium oligotrophicum) Is a Nitrogen-Fixing Symbiont of Aeschynomene indica.

Takashi Okubo, Shohei Fukushima, Manabu Itakura, Kenshiro Oshima, Aphakorn Longtonglang, Neung Teaumroong, Hisayuki Mitsui, Masahira Hattori, Reiko Hattori, Tsutomu Hattori and Kiwamu Minamisawa



Applied and Environmental Microbiology, April 2013; 79(8): 2542-2551

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3623176/
Non-contiguous finished genome sequence and description of Senegalemassilia anaerobia gen. nov., sp. nov.

Jean-Christophe Lagier, Khalid El Karkouri, Romain Rivet, Carine Couderc, Didier Raoult, Pierre-Edouard Fournier

Standards in Genomic Sciences, April 2013; 7(3): 343-356
Non-contiguous finished genome sequence and description of Peptoniphilus obesi sp. nov.

Ajay Kumar Mishra, Perrine Hugon, Thi-Thi Nguyen, Catherine Robert, Carine Couderc, Didier Raoult, Pierre-Edouard Fournier

Standards in Genomic Sciences, April 2013; 7(3): 357-369
Non-contiguous finished genome sequence & description of Peptoniphilus senegalensis sp. nov.

Ajay Kumar Mishra, Jean-Christophe Lagier, Thi-Tien Nguyen, Didier Raoult, Pierre-Edouard Fournier

Standards in Genomic Sciences, April 2013; 7(3): 370-381
Non-contiguous finished genome sequence & description of Enterobaceter massiliensis sp. nov.

Jean-Christophe Lagier, Khalid El Karkouri, Ajay Kumar Mishra, Catherine Robert, Didier Raoult, and Pierre-Edouard Fournier.

Standards in Genomic Sciences, April 2013; 7(3): 399-412
Non-contiguous finished genome sequence and description of Alistipes obesi sp. nov.

Perrine Hugon, Dhamodharan Ramasamy, Romain Rivet, Didier Raoult, Pierre-Edouard Fournier Standards in Genomic Sciences, April 2013; 7(3): 427-439
Genome Analysis Suggests that the Soil Oligotrophic Bacterium Agromonas oligotrophica (Bradyrhizobium oligotrophicum) Is a Nitrogen-Fixing Symbiont of Aeschynomene indica.

Takashi Okubo, Shohei Fukushima, Manabu Itakura, Kenshiro Oshima, Aphakorn Longtonglang, Neung Teaumroong, Hisayuki Mitsui, Masahira Hattori, Reiko Hattori, Tsutomu Hattori, and Kiwamu Minamisawa



Applied and Environmental Microbiology, April 2013; 79(8): 2542-2551.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3623176/
The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle.

Jagan Srinivasan, Adler R. Dillman, Marissa G. Macchietto, Liisa Heikkinen, Merja Lakso, Kelley M. Fracchia, Igor Antoshechkin, Ali Mortazavi, Garry Wong, and Paul W. Sternberg.



Genetics, April 2013; 193(4): 1279-1295.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3606103/
Non-contiguous finished genome sequence and description of Brevibacillus massiliensis sp. nov.

Perrine Hugon, Ajay Kumar Mishra, Thi-Tien Nguyen, Didier Raoult, Pierre-Edouard Fournier Standards in Genomic Sciences, April 2013; 8(1): 1-14.
The Hypomethylated Partial Restriction (HMPR) method reduces the repetitive content of genomic libraries in Norway spruce (Picea abies).

Hanna Larsson, Emanuele De Paoli, Michele Morgante, Martin Lascoux, and Niclas Gyllenstrand.



Tree Genetics & Genomes, April 2013; 9(2): 601-612.
Methods for detecting mutations.

Inventors: Anthony P. Shuber, Cecilia Fernandez



US Patent Application: 2013/0109576 A1; Publication Date: 2 May 2013;

http://www.freepatentsonline.com/y2013/0109576.html
A multi-platform draft de novo genome assembly and comparative analysis for the Scarlet Macaw (Ara macao).

Christopher M. Seabury, Scot E Dowd, Paul M Seabury, Terje Raudsepp, Donald J Brightsmith, Poul Liboriussen, Yvette Halley, Colleen A. Fisher, Elaine Owens, Ganesh Viswanathan, Ian R. Tizard



PloS One, 8 May 2013; 8(5): e62415, 20 pp.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3648530/
Methods and compositions for generating and amplifying DNA libraries for sensitive detection and analysis of DNA methylation.

Inventors: Vladimir L. Makarov, Emmanuel Kamberov, Tong Sun, Jonathon H. Pinter, Brendan J. Tarrier, Eric E. Bruening, Takao Kurihara, Tim Tesmer, Joseph M'Mwirichia


United States Patent: US 8440404 B2, Publication Date: 14 May 2013

http://www.google.com/patents/US8440404
Nucleic acids of Pichia pastoris and use thereof for recombinant production of proteins

Inventors: Nico Callewaert, Kristof De Schutter, Petra Tiels, Yao-Cheng Lin


United States Patent: US 8440456 B2, Publication Date: 14 May 2013

http://www.google.com/patents/US8440456
The genome of the mustard leaf beetle encodes two active xylanases originally acquired from bacteria through horizontal gene transfer.

Yannick Pauchet, and David G. Heckel.

Proceedings Royal Society London, B: Biological Sci., 22 May 2013; 280(1763): 20131021, 7 pp.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3774241/
Methods of enhancing biogenic production of methane from hydrocarbon-bearing formations.

Inventors: Gerardo Vicente Toledo, Toby Howard Richardson, Ulrich Stingl, Eric J. Mathur, and J. Craig Venter.



United States Patent: US 8448702 B2, Publication Date: 28 May 2013;

https://www.google.com/patents/US8448702



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