Publication list on hydroshear use (to 11 January 2017) 2017


Use of In Vivo-Induced Antigen Technology (IVIAT) to Identify Virulence Factors of Porphyromonas gingivalis



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Use of In Vivo-Induced Antigen Technology (IVIAT) to Identify Virulence Factors of Porphyromonas gingivalis.


Shannon M. Wallet, Jin Chung and Martin Handfield

Methods in Molecular Biology, Spring 2010; 666(2): 181-195
Computerprogramme zur Modellierung genregulatorischer Netzwerke.

Hendrik Hache, and Christoph Wierling.

Laborwelt, Spring 2010; 11(1): 31-32.

http://pubman.mpdl.mpg.de/pubman/item/escidoc:1583998/component/escidoc:1583997/LW2010_01.pdf
Integrated DNA preparation for pyrosquencer onto a polymer microfluidic device.

P. Khuntontong, C. H. Kua, M. Gong, S. H. I. Foo, AR Abdur Rahman, S. Goel, and Z. P. Wang.

Nanotech, 2010; 3: 145-148

http://www.nsti.org/publications/Nanotech/2010/pdf/597.pdf

 

Recent advances in DNA sequencing methods – general principles of sample preparation.

Sten Linnarsson



Experimental Cell Research, 1 May 2010; 316(8): 1339-1343

http://linnarssonlab.org/pdf/Experimental%20Cell%20Research%202010.pdf
A critical assessment of cross-species detection of gene duplicates using comparative genomic hybridization.

Heather E Machado, Suzy CP Renn

BMC Genomics, 13 May 2010; 11: 304, 9 pp.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2876127/
Methylation analysis of mate pairs.

Inventors: Kevin McKernan, Benjamin Schroeder, and Victoria Boyd.



US Patent Application: 2010/0120034 A1, Publication Date: 13 May 2010;

https://www.google.com/patents/US20100120034
Solid phase technique for selectively isolating nucleic acids.

Inventors: Kevin McKernan, Paul McEwan, and William Morris.



US Patent Application: 2010/0121044 A1, Publication Date: 13 May 2010;

https://www.google.com/patents/US20100121044
The Mating Type Locus (MAT) and Sexual Reproduction of Cryptococcus heveanensis: Insights into the Evolution of Sex and Sex-Determining Chromosomal Regions in Fungi.

Banu Metin, Keisha Findley, and Joseph Heitman



PLoS Genetics, 20 May 2010; 6(5): e1000961, 19 pp.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2873909/
Comparison of homoeolocus organisation in paired BAC clones from white clover (Trifolium repens L.) and microcolinearity with model legume species.

Melanie L Hand, Noel OI Cogan, Timothy I Sawbridge, German C Spangenberg, John W Forster



BMC Plant Biology, 24 May 2010; 10: 94, 14 pp.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3095360/
Vectors, kits and methods for cloning DNA.

Inventors: David A. Mead, Ronald Godiska, Thomas W. Schoenfeld, and Spencer Hermanson.



United States Patent: US 7723103 B2, Publication Date: 25 May 2010.

https://www.google.com/patents/US7723103
Sequencing, annotation and comparative genome analysis of the gerbil-adapted Helicobacter pylori strain B8.

Max Farnbacher, Thomas Jahns, Dirk Willrodt, Rolf Daniel, Rainer Haas, Alexander Goesmann, Stefan Kurtz and Gabriele Rieder

BMC Genomics, 27 May 2010; 11: 335, 22 pp.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3091624/
A highly conserved gene island of three genes on chromosome 3B of hexaploid wheat: diverse gene function and genomic structure maintained in a tightly linked block.

James Breen, Thomas Wicker, Xiuying Kong, Juncheng Zhang, Wujun Ma, Etienne Paux, Catherine Feuillet, Rudi Appels, and Matthew Bellgard.

BMC Plant Biology, 27 May 2010; 10: 98, 15 pp.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3017796/
Wheat beta-expansin (EXPB11) genes: Identification of the expressed gene on chromosome 3BS carrying a pollen allergen domain.

James Breen, Dora Li, David S Dunn, Ferenc Békés, Xiuying Kong, Juncheng Zhang, Jizeng Jia, Thomas Wicker, Rohit Mago, Wujun Ma, Matthew Bellgard and Rudi Appels



BMC Plant Biology, 27 May 2010; 10: 99, 11 pp.

http://www.biomedcentral.com/1471-2229/10/99
Breakpoint analysis of balanced chromosome rearrangements by next-generation paired-end sequencing.

Wei Chen, Reinhard Ullmann, Claudia Langnick, Corinna Menzel, Zofia Wotschofsky, Hao Hu, Andreas Döring, Yuhui Hu, Hui Kang, Andreas Tzschach, Maria Hoeltzenbein, Heidemarie Neitzel, Susanne Markus, Eberhard Wiedersberg, Gerd Kistner, Conny MA van Ravenswaaij-Arts, Tjitske Kleefstra, Vera M Kalscheuer & Hans-Hilger Ropers



Eur J Human Genetics, May 2010; 18(5): 539-543

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2987311/
Population Structure of Rhizoctonia oryzae-sativae in California Rice Fields.

Patcharavipa Chaijuckam, Jong-Min Baek, Christopher A. Greer, Robert K. Webster, and R. Michael Davis

Phytopathology, May 2010; 100(5): 502-510

http://apsjournals.apsnet.org/doi/pdf/10.1094/PHYTO-100-5-0502
Identification and genetic analysis of the APOSPORY locus in Hypericum perforatum L.

Anna Schallau, Francesco Arzenton, Amal J. Johnston, Urs Hähnel, David Koszegi, Frank R. Blattner, Lothar Altschmied, Georg Haberer, Gianni Barcaccia, and Helmut Bäumlein.

The Plant Journal, 1 June 2010; 62(5): 773-784.

https://www.researchgate.net/profile/Frank_Blattner/publication/41759690_Identification_and_genetic_analysis_of_the_APOSPORY_locus_in_Hypericum_perforatum_L/links/0046351499bbc86d88000000.pdf
From array-based hybridization of Helicobacter pylori isolates to the complete genome sequence of an isolate associated with MALT lymphoma.

Jean-Michel Thiberge, Caroline Boursaux-Eude, Philippe Lehours, Marie-Agnès Dillies, Sophie Creno, Jean-Yves Coppée, Zoé Rouy, Aurélie Lajus, Laurence Ma, Christophe Burucoa, Anne Ruskoné-Foumestraux, Anne Courillon-Mallet, Hilde De Reuse, Ivo Gomperts Boneca, Dominique Lamarque, Francis Mégraud, Jean-Charles Delchier, Claudine Médigue, Christiane Bouchier, Agnès Labigneand Josette Raymond

BMC Genomics, 10 June 2010; 11: 368, 12 pp.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3091627/
Reassociation kinetics-based approach for partial genome sequencing of the cattle tick, Rhipicephalus (Boophilus) microplus.

Felix D Guerrero, Paula Moolhuijzen, Daniel G Peterson, Shelby Bidwell, Elisabet Caler, Matthew Bellgard, Vishvanath M Nene and Appolinaire Djikeng



BMC Genomics, 11 June 2010; 11: 374, 9 pp.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2893602/
Methods for screening for genes and small molecules that activate mammalian receptor proteins

Inventors: Deane Louis Falcone, and John M. Littleton.



United States Patent: US 7737327 B2, Publication Date: 15 June 2010;

https://www.google.com/patents/US7737327
Method of preparing libraries of template polynucleotides 

Inventors: Niall Anthony Gormley, Geoffrey Paul Smith, David Bentley, Roberto Rigatti, Shujun Luo



United States Patent: US 7741463 B2, Publication Date: 22 June 2010;

https://www.google.com/patents/US7741463
Genome size evolution in pufferfish: an insight from BAC clone-based Diodon holocanthus genome sequencing.

Baocheng Guo, Ming Zou, Xiaoni Gan and Shunping He



BMC Genomics, 23 June 2010; 11: 396, 15 pp.

http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-11-396
Molluscan Evolutionary Genomics.

W. Brian Simison, Jeffrey L. Boore



Lawrence Berkeley National Laboratory, 30 June 2010; LBNL Paper LBNL-59179, pp.1-24

http://escholarship.org/uc/item/9xc2m11g



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